Protein: LSM5
U6 snRNA-associated Sm-like protein LSm5

Gene: LSM5
Organism: Homo sapiens
Interactions: 63
UniProt ID: Q9Y4Y9

Gene Ontology (top 5):
GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005688 - U6 snRNP

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

912259

LSM6
U6 snRNA-associated Sm-like protein LSm6

9

20

High-throughput

0.976

High

1356295

LSM7
U6 snRNA-associated Sm-like protein LSm7

9

20

High-throughput

0.976

High

912007

RUXF
Small nuclear ribonucleoprotein F

8

20

High-throughput

0.975

High

912210

LSM3
U6 snRNA-associated Sm-like protein LSm3

5

20

High-throughput

0.931

High

911778

RUXE
Small nuclear ribonucleoprotein E

5

12

High-throughput

0.925

High

1377916

LSM4
U6 snRNA-associated Sm-like protein LSm4

3

20

High-throughput

0.861

High

167727

LSM1
U6 snRNA-associated Sm-like protein LSm1

2

20

High-throughput

0.811

High

202555

PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3

2

9

High-throughput

0.811

High

321443

LSM8
U6 snRNA-associated Sm-like protein LSm8

2

20

High-throughput

0.811

High

912601

SMD2
Small nuclear ribonucleoprotein Sm D2

2

20

High-throughput

0.811

High

1063316

SART3
Squamous cell carcinoma antigen recognized by T-cells 3

2

20

High-throughput

0.811

High

1198422

PATL1
Protein PAT1 homolog 1

2

8

High-throughput

0.811

High

1377522

LSM2
U6 snRNA-associated Sm-like protein LSm2

2

20

High-throughput

0.811

High

448867

RU1C
U1 small nuclear ribonucleoprotein C

1

5

High-throughput

0.691

High

539203

RSMB
Small nuclear ribonucleoprotein-associated proteins B and B'

1

14

High-throughput

0.691

High

912764

SMD3
Small nuclear ribonucleoprotein Sm D3

1

20

High-throughput

0.691

High

928048

RSMN
Small nuclear ribonucleoprotein-associated protein N

1

14

High-throughput

0.691

High

1184413

MEPCE
7SK snRNA methylphosphate capping enzyme

3

7

High-throughput

0.667

High

197112

PRP4
U4/U6 small nuclear ribonucleoprotein Prp4

2

13

High-throughput

0.628

High

1234279

ZGPAT
Zinc finger CCCH-type with G patch domain-containing protein

2

10

High-throughput

0.628

High

1239404

ZN511
Zinc finger protein 511

2

2

High-throughput

0.628

High

1312112

RBM42
RNA-binding protein 42

2

7

High-throughput

0.628

High

1332267

STPAP
Speckle targeted PIP5K1A-regulated poly(A) polymerase

2

5

High-throughput

0.628

High

1349687

AKA7G
A-kinase anchor protein 7 isoform gamma

2

10

High-throughput

0.611

High

1287697

DDT4L
DNA damage-inducible transcript 4-like protein

2

3

High-throughput

0.606

High

380889

S100B
Protein S100-B

2

0

High-throughput

0.602

High

1377025

POLH
DNA polymerase eta

2

0

High-throughput

0.602

High

913436

TBPL1
TATA box-binding protein-like 1

2

0

High-throughput

0.580

High

1330801

PLK3
Serine/threonine-protein kinase PLK3

2

0

High-throughput

0.580

High

1288079

TMCO6
Transmembrane and coiled-coil domain-containing protein 6

2

1

High-throughput

0.574

High

329061

TCL1B
T-cell leukemia/lymphoma protein 1B

2

3

High-throughput

0.553

High

199849

SNUT1
U4/U6.U5 tri-snRNP-associated protein 1

1

5

High-throughput

0.536

High

300298

PRP6
Pre-mRNA-processing factor 6

1

20

High-throughput

0.536

High

451622

CLCA
Clathrin light chain A

1

2

High-throughput

0.536

High

792130

HD
Huntingtin

1

1

High-throughput

0.536

High

878388

NH2L1
NHP2-like protein 1

1

2

High-throughput

0.536

High

1037926

PRP4K
Serine/threonine-protein kinase PRP4 homolog

1

3

High-throughput

0.536

High

1085565

MK06
Mitogen-activated protein kinase 6

1

1

High-throughput

0.536

High

1261517

SNR27
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein

1

4

High-throughput

0.536

High

1263064

PRP31
U4/U6 small nuclear ribonucleoprotein Prp31

1

8

High-throughput

0.536

High

1313232

DDX23
Probable ATP-dependent RNA helicase DDX23

1

5

High-throughput

0.536

High

1048297

HNRPD
Heterogeneous nuclear ribonucleoprotein D0

1

2

High-throughput

0.508

High

1343602

EXOS5
Exosome complex component RRP46

1

3

High-throughput

0.508

High

199020

RFOX2
RNA binding protein fox-1 homolog 2

1

2

High-throughput

0.481

High

1138162

PR38B
Pre-mRNA-splicing factor 38B

1

3

High-throughput

0.481

High

1174878

LARP4
La-related protein 4

1

5

High-throughput

0.481

High

1235837

CPSF7
Cleavage and polyadenylation specificity factor subunit 7

1

1

High-throughput

0.481

High

1299713

QKI
KH domain-containing RNA-binding protein QKI

1

3

High-throughput

0.481

High

570226

CEBPB
CCAAT/enhancer-binding protein beta

1

7

High-throughput

0.479

High

673118

CCND2
G1/S-specific cyclin-D2

1

1

Small-scale

0.479

High

903645

WDR5
WD repeat-containing protein 5

1

14

High-throughput

0.479

High

918203

H4
Histone H4

1

4

High-throughput

0.479

High

1201805

ZCH18
Zinc finger CCCH domain-containing protein 18

1

5

High-throughput

0.479

High

1354995

ZRAN1
Ubiquitin thioesterase ZRANB1

1

4

High-throughput

0.479

High

1127738

PRC2B
Protein PRRC2B

1

0

High-throughput

0.460

High

324696

BAG3
BAG family molecular chaperone regulator 3

1

0

High-throughput

0.458

High

1297428

CI072
Guanine nucleotide exchange factor C9orf72

1

0

Small-scale

0.426

High

831847

CEBPA
CCAAT/enhancer-binding protein alpha

1

7

High-throughput

0.408

High

211315

AKA7A
A-kinase anchor protein 7 isoforms alpha and beta

1

10

High-throughput

0.407

High

1240149

RDH13
Retinol dehydrogenase 13

2

0

High-throughput

0.328

High

1301909

HPLN3
Hyaluronan and proteoglycan link protein 3

2

0

High-throughput

0.328

High

1169521

SMI10
Sperm-associated microtubule inner protein 10

2

0

High-throughput

0.316

High

1241696

MOT11
Monocarboxylate transporter 11

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024