Interactor 1: Q94AW9 (Q94AW9)
Ribosomal RNA-processing protein 40
Gene: At2g25355
Interactor 2: RRP4 (Q9ZVT7)
Exosome complex component RRP4 homolog (Ribosomal RNA-processing protein 4) (AtRRP4) (AtRrp4p)
Gene: RRP4
Species: Arabidopsis thaliana
Source: intact
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.33 | 1.00 | 0.575 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 18160042 |
| Identification Methods | tandem affinity purification |
| Interaction Type | association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | KH_6~Rrp40_N |
| Common GO terms | GO:0000176 - nuclear exosome (RNase complex) GO:0000177 - cytoplasmic exosome (RNase complex) GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0003723 - RNA binding GO:0005730 - nucleolus and 5 others more... |
| Homologous interactions | 5 |
Homologous interactions
Color coding for hit scores 
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| + | Dm | |
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| + | Sc | |
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| + | Tb | |
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
