HitPredict

Interactor 1: RTNLD (Q9FFS0)
Reticulon-like protein B4 (AtRTNLB4) (VirB2-interacting protein 3)
Gene: RTNLB4

Interactor 2: PR1B2 (Q9SIY7)
PRA1 family protein B2 (AtPRA1.B2)
Gene: PRA1B2

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.48	0.60	0.541

Property	Details
Experiments	21798944
Identification Methods	two hybrid, two hybrid array
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0005783 - endoplasmic reticulum
Homologous interactions	14

Homologous interactions

Color coding for hit scores

	1 257 At			1 213
+	At
		1322692 RTNLD_ARATH (1-257): 3.43e-98: 289: 100.00		PR1B5_ARATH (1-200): 2.99e-64: 199: 56.04
+	At
		1320701 RTNLD_ARATH (1-257): 3.43e-98: 289: 100.00		PR1F2_ARATH (23-195): 7.99e-50: 162: 37.50
+	At
		1340622 RTNLH_ARATH (9-256): 1.97e-80: 243: 37.90		PR1B5_ARATH (1-200): 2.99e-64: 199: 56.04
+	At
		1352354 RTNLH_ARATH (9-256): 1.97e-80: 243: 37.90		PR1B2_ARATH (1-213): 6.13e-63: 196: 100.00
+	At
		1338111 RTNLH_ARATH (9-256): 1.97e-80: 243: 37.90		PR1F4_ARATH (15-194): 7.09e-51: 164: 36.81
+	At
		1322691 RTNLD_ARATH (1-257): 3.43e-98: 289: 100.00		PR1A1_ARATH (41-180): 2.42e-24: 97.1: 20.81
+	Hs
		1343310 RTN4_HUMAN (2-257): 1.89e-59: 204: 21.32		PRAF1_HUMAN (12-188): 5.77e-47: 154: 24.59
+	Hs
		277763 RTN4_HUMAN (2-257): 1.89e-59: 204: 21.32		PRAF3_HUMAN (43-192): 4.07e-41: 139: 15.03
+	Hs
		307141 RTN3_HUMAN (31-257): 4.03e-53: 186: 20.68		PRAF1_HUMAN (12-188): 5.77e-47: 154: 24.59
+	Hs
		277625 RTN3_HUMAN (31-257): 4.03e-53: 186: 20.68		PRAF3_HUMAN (43-192): 4.07e-41: 139: 15.03
+	Hs
		242291 RTN4_HUMAN (2-257): 1.89e-59: 204: 21.32		PRAF2_HUMAN (43-192): 3.59e-32: 116: 16.99
+	Hs
		277705 RTN1_HUMAN (30-248): 6.14e-51: 179: 22.71		PRAF3_HUMAN (43-192): 4.07e-41: 139: 15.03
+	Dm
		52882 Q9VMV9_DROME (66-257): 3.82e-48: 169: 20.79		A1Z823_DROME (11-186): 1.19e-42: 144: 21.59
+	Dm
		52883 Q9VMW2_DROME (71-257): 3.38e-47: 157: 20.81		A1Z823_DROME (11-186): 1.19e-42: 144: 21.59