HitPredict

Interactor 1: LN28A (Q9H9Z2)
Protein lin-28 homolog A (Lin-28A) (Zinc finger CCHC domain-containing protein 1)
Gene: LIN28A

Interactor 2: DDX28 (Q9NUL7)
Probable ATP-dependent RNA helicase DDX28 (EC 3.6.4.13) (Mitochondrial DEAD box protein 28)
Gene: DDX28

Species: Homo sapiens

Source: mint

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.60	0.60	0.601

Property	Details
Experiments	33961781, 34816099
Identification Methods	affinity chromatography technology, anti bait coimmunoprecipitation, anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005730 - nucleolus GO:0005829 - cytosol
Homologous interactions	18

Homologous interactions

Color coding for hit scores

	1 209 Hs			1 540
+	Hs
		1271664 LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00		DDX17_HUMAN (59-535): 4.77e-132: 403: 24.90
+	Hs
		571600 LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00		DDX5_HUMAN (51-535): 8.85e-133: 401: 26.34
+	Hs
		134211 LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00		DDX3X_HUMAN (4-536): 2.55e-126: 386: 20.84
+	Hs
		1346049 YBOX2_HUMAN (16-199): 1.7e-44: 153: 23.86		DDX28_HUMAN (1-540): 2.48e-135: 405: 100.00
+	Hs
		931442 YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16		DDX28_HUMAN (1-540): 2.48e-135: 405: 100.00
+	Hs
		931311 YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16		DDX17_HUMAN (59-535): 4.77e-132: 403: 24.90
+	Hs
		571395 YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16		DDX5_HUMAN (51-535): 8.85e-133: 401: 26.34
+	Hs
		78151 YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16		B5BUE6_HUMAN (51-535): 1.88e-132: 400: 26.34
+	Hs
		133971 YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16		DDX3X_HUMAN (4-536): 2.55e-126: 386: 20.84
+	Ce
		248035 O62213_CAEEL (21-126): 1.03e-36: 129: 31.82		Q9XUW5_CAEEL (73-533): 6.12e-120: 366: 25.97
+	Ce
		106462 G5EDV3_CAEEL (16-193): 2.24e-32: 120: 18.62		Q9XUW5_CAEEL (73-533): 6.12e-120: 366: 25.97
+	Hs
		1328085 LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00		DDX47_HUMAN (102-534): 3.12e-48: 175: 34.40
+	Ce
		248030 O62213_CAEEL (21-126): 1.03e-36: 129: 31.82		Q9N3F4_CAEEL (128-493): 1.92e-39: 154: 30.50
+	Ce
		106457 G5EDV3_CAEEL (16-193): 2.24e-32: 120: 18.62		Q9N3F4_CAEEL (128-493): 1.92e-39: 154: 30.50
+	Ec
		464324 CSPE_ECOLI (37-111): 2.06e-31: 111: 37.33		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93
+	Ec
		465120 CSPC_ECOLI (37-111): 3.39e-31: 110: 37.33		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93
+	Ec
		465119 CSPA_ECOLI (39-111): 1.13e-30: 109: 41.10		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93
+	Ec
		464297 CSPD_ECOLI (41-106): 3.12e-25: 95.4: 34.85		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93