HitPredict

Interactor 1: SL30A (Q9LHP2)
Serine/arginine-rich SC35-like splicing factor SCL30A (At-SCL30A) (AtSCL30A) (SC35-like splicing factor 30A) (Serine/arginine-rich splicing factor 30A)
Gene: SCL30A

Interactor 2: SR30 (Q9XFR5)
Serine/arginine-rich splicing factor SR30 (At-SR30) (At-SRp30) (AtSR30) (SF2/ASF-like splicing modulator Srp30) (Serine-arginine rich RNA binding protein 30)
Gene: SR30

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.46	1.00	0.681

Property	Details
Experiments	18674533
Identification Methods	pull down
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0005681 - spliceosomal complex GO:0005829 - cytosol GO:0008380 - RNA splicing GO:0016607 - nuclear speck
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 262 At			1 268
+	Zm
		30271 A0A1D6K4S7_MAIZE (14-121): 4.27e-33: 126: 37.04		A0A1D6M1U3_MAIZE (1-187): 1.38e-65: 209: 68.06
+	Hs
		1099459 SRS12_HUMAN (37-257): 1.67e-38: 136: 34.07		SRSF6_HUMAN (8-197): 2.59e-56: 185: 34.33
+	At
		1169114 SRC28_ARATH (28-203): 6.87e-29: 111: 39.21		SR30_ARATH (1-268): 6.43e-65: 205: 100.00
+	Hs
		1062062 SRS12_HUMAN (37-257): 1.67e-38: 136: 34.07		SRSF4_HUMAN (8-260): 6.57e-49: 170: 38.78
+	At
		198817 SL30A_ARATH (1-262): 2.98e-32: 120: 100.00		SR34_ARATH (1-242): 3.49e-56: 184: 60.71
+	Hs
		1099617 RBM19_HUMAN (39-150): 1.94e-28: 115: 29.46		SRSF6_HUMAN (8-197): 2.59e-56: 185: 34.33
+	Hs
		1099321 RBM19_HUMAN (39-150): 1.94e-28: 115: 29.46		SRSF5_HUMAN (5-253): 3.78e-56: 183: 36.33
+	At
		198809 SRC28_ARATH (28-203): 6.87e-29: 111: 39.21		SR34_ARATH (1-242): 3.49e-56: 184: 60.71
+	Hs
		1062162 RBM19_HUMAN (39-150): 1.94e-28: 115: 29.46		SRSF4_HUMAN (8-260): 6.57e-49: 170: 38.78
+	Hs
		284129 SRS10_HUMAN (37-238): 1.49e-25: 103: 28.25		SRSF4_HUMAN (8-260): 6.57e-49: 170: 38.78
+	At
		1354408 SRC33_ARATH (1-213): 2.63e-45: 155: 74.65		RSZ33_ARATH (3-101): 3.47e-21: 92.2: 43.43
+	Hs
		284057 SRS10_HUMAN (37-238): 1.49e-25: 103: 28.25		PABP1_HUMAN (8-196): 9.46e-36: 136: 18.56
+	Hs
		1016541 SRS12_HUMAN (37-257): 1.67e-38: 136: 34.07		SRSF3_HUMAN (6-102): 1.03e-22: 93.3: 37.62
+	Xl
		1362166 ELAV2_XENLA (30-119): 9.42e-25: 103: 30.00		ELAV2_XENLA (6-187): 7.45e-32: 122: 18.99
+	At
		1354407 SL30A_ARATH (1-262): 2.98e-32: 120: 100.00		RSZ33_ARATH (3-101): 3.47e-21: 92.2: 43.43
+	Hs
		1016685 RBM19_HUMAN (39-150): 1.94e-28: 115: 29.46		SRSF3_HUMAN (6-102): 1.03e-22: 93.3: 37.62
+	At
		1169110 SRC28_ARATH (28-203): 6.87e-29: 111: 39.21		RSZ33_ARATH (3-101): 3.47e-21: 92.2: 43.43
+	Hs
		1061075 SRS12_HUMAN (37-257): 1.67e-38: 136: 34.07		SRSF1_HUMAN (95-225): 3.51e-10: 60.9: 17.42
+	Hs
		284119 SRS10_HUMAN (37-238): 1.49e-25: 103: 28.25		SRSF3_HUMAN (6-102): 1.03e-22: 93.3: 37.62
+	Hs
		284128 SRS10_HUMAN (37-238): 1.49e-25: 103: 28.25		SRSF1_HUMAN (95-225): 3.51e-10: 60.9: 17.42