HitPredict

Interactor 1: RUXX (O74016)
Putative snRNP Sm-like protein
Gene: PH1518.2

Interactor 2: RUXX (O74016)
Putative snRNP Sm-like protein
Gene: PH1518.2

Species: Pyrococcus horikoshii OT3

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.34	1.00	0.590

Property	Details
Experiments	16356270
Identification Methods	two hybrid
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0034715 - pICln-Sm protein complex GO:1990904 - ribonucleoprotein complex
Homologous interactions	16

Homologous interactions

Color coding for hit scores

	1 75 Ph			1 75
+	Zm
		38861 A0A1D6MPT6_MAIZE (5-75): 1.93e-30: 106: 25.00		A0A1D6MPT6_MAIZE (5-75): 1.93e-30: 106: 25.00
+	At
		1352880 RUXF_ARATH (1-75): 3.39e-31: 105: 32.00		RUXF_ARATH (1-75): 3.39e-31: 105: 32.00
+	Hs
		911792 LSM6_HUMAN (3-75): 2.05e-31: 106: 34.25		RUXF_HUMAN (1-73): 1.19e-30: 104: 32.88
+	Hs
		912260 LSM6_HUMAN (3-75): 2.05e-31: 106: 34.25		LSM4_HUMAN (5-75): 5.63e-29: 101: 25.00
+	Hs
		912008 RUXF_HUMAN (1-73): 1.19e-30: 104: 32.88		LSM4_HUMAN (5-75): 5.63e-29: 101: 25.00
+	Dm
		1369699 Q9VKW8_DROME (5-75): 3.1e-28: 100: 26.39		Q9W2P5_DROME (8-75): 1.15e-28: 99.2: 35.29
+	Hs
		912021 LSM6_HUMAN (3-75): 2.05e-31: 106: 34.25		RUXG_HUMAN (1-75): 2.06e-25: 90.7: 22.67
+	Hs
		911790 RUXF_HUMAN (1-73): 1.19e-30: 104: 32.88		RUXG_HUMAN (1-75): 2.06e-25: 90.7: 22.67
+	Hs
		68408 RUXF_HUMAN (1-73): 1.19e-30: 104: 32.88		RUXGL_HUMAN (1-75): 1.35e-24: 88.8: 22.67
+	Sp
		145524 LSM4_SCHPO (5-75): 1.35e-26: 95.4: 27.78		LSM4_SCHPO (5-75): 1.35e-26: 95.4: 27.78
+	At
		1340905 LSM6A_ARATH (2-73): 1.5e-30: 104: 33.33		LSM7_ARATH (8-74): 4.46e-12: 57.6: 33.33
+	Hs
		912256 LSM6_HUMAN (3-75): 2.05e-31: 106: 34.25		LSM7_HUMAN (8-74): 1.18e-10: 54.1: 28.00
+	Hs
		911992 RUXF_HUMAN (1-73): 1.19e-30: 104: 32.88		LSM7_HUMAN (8-74): 1.18e-10: 54.1: 28.00
+	Hs
		1356296 LSM4_HUMAN (5-75): 5.63e-29: 101: 25.00		LSM7_HUMAN (8-74): 1.18e-10: 54.1: 28.00
+	Sc
		767814 RUXF_YEAST (2-75): 5.98e-26: 92.7: 30.67		LSM4_YEAST (5-75): 2.45e-12: 60.3: 19.51
+	Sc
		770320 RUXF_YEAST (2-75): 5.98e-26: 92.7: 30.67		RUXG_YEAST (7-74): 3.96e-12: 57.2: 28.17