HitPredict

Interactor 1: SNRPA (P09012)
U1 small nuclear ribonucleoprotein A (U1 snRNP A) (U1-A) (U1A)
Gene: SNRPA

Interactor 2: CHD8 (Q9HCK8)
Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.-) (ATP-dependent helicase CHD8) (Helicase with SNF2 domain 1)
Gene: CHD8

Species: Homo sapiens

Source: innatedb

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	17938208
Identification Methods	anti tag coimmunoprecipitation
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003677 - DNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm
Homologous interactions	11

Homologous interactions

Color coding for hit scores

	1 282 Hs			1 2581
+	Hs
		550477 PABP1_HUMAN (10-223): 3.85e-20: 91.9: 14.82		CHD8_HUMAN (1-2581): 0: 2337: 100.00
+	Hs
		1090302 ELAV2_HUMAN (156-281): 1.61e-13: 71.8: 15.91		CHD8_HUMAN (1-2581): 0: 2337: 100.00
+	Hs
		687392 PTBP1_HUMAN (1-281): 2.59e-55: 189: 20.42		CHD3_HUMAN (380-2065): 0: 1026: 23.32
+	Hs
		687413 PTBP1_HUMAN (1-281): 2.59e-55: 189: 20.42		CHD4_HUMAN (500-2065): 0: 998: 23.41
+	Hs
		550249 PABP1_HUMAN (10-223): 3.85e-20: 91.9: 14.82		CHD3_HUMAN (380-2065): 0: 1026: 23.32
+	Hs
		1088320 PABP4_HUMAN (11-199): 2.34e-18: 86.5: 18.42		CHD3_HUMAN (380-2065): 0: 1026: 23.32
+	Hs
		550289 PABP1_HUMAN (10-223): 3.85e-20: 91.9: 14.82		CHD4_HUMAN (500-2065): 0: 998: 23.41
+	Hs
		1101959 PABP4_HUMAN (11-199): 2.34e-18: 86.5: 18.42		CHD4_HUMAN (500-2065): 0: 998: 23.41
+	Hs
		243496 PTBP3_HUMAN (2-281): 3.3e-49: 172: 19.44		SMCA5_HUMAN (695-1722): 0: 901: 26.43
+	Hs
		550308 PABP1_HUMAN (10-223): 3.85e-20: 91.9: 14.82		CHD9_HUMAN (2104-2481): 3.9e-107: 387: 29.62
+	Hs
		1101977 PABP4_HUMAN (11-199): 2.34e-18: 86.5: 18.42		CHD9_HUMAN (2104-2481): 3.9e-107: 387: 29.62