HitPredict

Interactor 1: PRP9 (P19736)
Pre-mRNA-splicing factor PRP9
Gene: PRP9

Interactor 2: SMD1 (Q02260)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)
Gene: SMD1

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.79 1.00 0.892

The method score is based on:

Property Details
Experiments 11805826, 34349264, 37968396, 16429126
Identification Methods tandem affinity purification, affinity chromatography technology
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~SF3A3
Common GO terms GO:0000395 - mRNA 5'-splice site recognition
GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
and 3 others

more...
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 530
Sc

1 146
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024