HitPredict

Interactor 1: SR34A (A2RVS6)
Serine/arginine-rich splicing factor SR34A (At-SR34A) (At-SRp34A) (AtSR34A) (SER/ARG-rich protein 34A)
Gene: SR34A

Interactor 2: UBQ3 (Q1EC66)
Polyubiquitin 3 [Cleaved into: Ubiquitin]
Gene: UBQ3

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	23667124
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 300 At			1 306
+	At
		198808 SR34_ARATH (1-290): 1.33e-52: 176: 48.04		UBQ3_ARATH (1-306): 3.35e-132: 379: 100.00
+	At
		198413 PABP4_ARATH (7-202): 9.57e-32: 126: 17.82		UBQ3_ARATH (1-306): 3.35e-132: 379: 100.00
+	At
		1050758 PABP5_ARATH (2-166): 3.02e-20: 92.9: 13.17		UBQ3_ARATH (1-306): 3.35e-132: 379: 100.00
+	Rn
		1224506 PABP1_RAT (5-210): 6.39e-34: 132: 17.06		UBC_RAT (1-257): 4.58e-97: 304: 93.39
+	Mm
		508962 PABP1_MOUSE (5-210): 6.71e-34: 132: 17.06		UBC_MOUSE (1-257): 1.36e-97: 304: 93.39
+	Hs
		507173 SRSF1_HUMAN (2-201): 4.03e-50: 168: 51.50		UBB_HUMAN (153-305): 2.52e-64: 204: 95.43
+	Hs
		507876 SRSF1_HUMAN (2-201): 4.03e-50: 168: 51.50		UBC_HUMAN (1-153): 1.27e-52: 184: 95.43
+	Hs
		987008 SRSF6_HUMAN (8-190): 2.82e-50: 171: 38.80		RS27A_HUMAN (153-228): 2.63e-43: 147: 96.05
+	Hs
		507474 PABP1_HUMAN (5-210): 5.63e-34: 132: 17.06		UBC_HUMAN (1-153): 1.27e-52: 184: 95.43
+	Hs
		987001 SRSF1_HUMAN (2-201): 4.03e-50: 168: 51.50		RS27A_HUMAN (153-228): 2.63e-43: 147: 96.05
+	Hs
		507919 PABP4_HUMAN (1-97): 2.53e-21: 96: 19.39		UBC_HUMAN (1-153): 1.27e-52: 184: 95.43
+	Hs
		425468 SRSF1_HUMAN (2-201): 4.03e-50: 168: 51.50		ISG15_HUMAN (76-232): 2.23e-24: 98.5: 33.13
+	Hs
		1099088 SRSF5_HUMAN (5-190): 1.65e-51: 172: 36.02		OASL_HUMAN (1-81): 1.9e-10: 63.5: 30.86
+	Hs
		1099367 SRSF6_HUMAN (8-190): 2.82e-50: 171: 38.80		OASL_HUMAN (1-81): 1.9e-10: 63.5: 30.86
+	Hs
		425279 PABP1_HUMAN (5-210): 5.63e-34: 132: 17.06		ISG15_HUMAN (76-232): 2.23e-24: 98.5: 33.13
+	Hs
		1098972 SRSF9_HUMAN (2-229): 2.62e-49: 165: 44.11		OASL_HUMAN (1-81): 1.9e-10: 63.5: 30.86
+	Hs
		425443 SRSF3_HUMAN (6-96): 1.92e-24: 98.4: 38.46		ISG15_HUMAN (76-232): 2.23e-24: 98.5: 33.13
+	Hs
		550301 PABP1_HUMAN (5-210): 5.63e-34: 132: 17.06		OASL_HUMAN (1-81): 1.9e-10: 63.5: 30.86
+	Hs
		1101969 PABP4_HUMAN (1-97): 2.53e-21: 96: 19.39		OASL_HUMAN (1-81): 1.9e-10: 63.5: 30.86
+	Hs
		114547 H0YIB4_HUMAN (113-178): 2.49e-21: 88.4: 53.73		OASL_HUMAN (1-81): 1.9e-10: 63.5: 30.86