Interactor 1: RPOD (P26480)
RNA polymerase sigma factor RpoD (Sigma-70)
Gene: RPOD
Interactor 2: RPOD (P26480)
RNA polymerase sigma factor RpoD (Sigma-70)
Gene: RPOD
Species: Pseudomonas aeruginosa PAO1
Source: intact
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.34 | 1.00 | 0.590 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 18826409 |
| Identification Methods | two hybrid |
| Interaction Type | physical association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | Sigma70_ner~Sigma70_ner, Sigma70_ner~Sigma70_r1_2, Sigma70_ner~Sigma70_r2, Sigma70_r1_1~Sigma70_r1_2, Sigma70_r1_1~Sigma70_r2, Sigma70_r1_2~Sigma70_r2, Sigma70_r1_2~Sigma70_r3, Sigma70_r2~Sigma70_r2, Sigma70_r2~Sigma70_r3, Sigma70_r2~Sigma70_r4, Sigma70_r3~Sigma70_r4, Sigma70_r4~Sigma70_r4 |
| Common GO terms | GO:0003677 - DNA binding GO:0005737 - cytoplasm GO:0006352 - DNA-templated transcription initiation GO:0016987 - sigma factor activity |
| Homologous interactions | 8 |
Homologous interactions
Color coding for hit scores 
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
