HitPredict

Interactor 1: RU1A (P32605)
U1 small nuclear ribonucleoprotein A (U1 snRNP A) (U1-A) (U1A) (Mutant U1 die protein 1)
Gene: MUD1

Interactor 2: RU17 (Q00916)
U1 small nuclear ribonucleoprotein 70 kDa homolog (U1 70K) (U1 snRNP 70 kDa homolog) (U1-70K) (U1 small nuclear ribonucleoprotein SNP1) (U1 snRNP protein SNP1)
Gene: SNP1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.93	1.00	0.965

The method score is based on:

Property	Details
Experiments	11805826, 9630245, 16554755, 16429126, 29051543, 37968396, 21558325
Identification Methods	tandem affinity purification, affinity chromatography technology, pull down, x-ray crystallography
Interaction Type	physical association, direct interaction, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	RRM_1~RRM_1, RRM_1~U1snRNP70_N
Common GO terms	GO:0000243 - commitment complex GO:0000395 - mRNA 5'-splice site recognition GO:0000398 - mRNA splicing, via spliceosome GO:0005634 - nucleus GO:0005681 - spliceosomal complex and 3 others more... GO:0005685 - U1 snRNP GO:0030619 - U1 snRNA binding GO:0071004 - U2-type prespliceosome
Homologous interactions	1

Homologous interactions

Color coding for hit scores

	1	298
Sc

1	300

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024