HitPredict

Interactor 1: SKI2 (P35207)
Antiviral helicase SKI2 (EC 3.6.4.13) (Superkiller protein 2)
Gene: SKI2

Interactor 2: SKI8 (Q02793)
Antiviral protein SKI8 (Superkiller protein 8)
Gene: SKI8

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.93 1.00 0.967

The method score is based on:

Property Details
Experiments 11805837, 10744028, 16429126, 18042677, 16554755, 37968396, 16043509
Identification Methods anti tag coimmunoprecipitation, affinity chromatography technology, tandem affinity purification, two hybrid, pull down
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains DSHCT~WD40
Common GO terms GO:0006402 - mRNA catabolic process
GO:0051607 - defense response to virus
GO:0055087 - Ski complex
GO:0070478 - nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
GO:0070481 - nuclear-transcribed mRNA catabolic process, non-stop decay
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 1287
Sc

1 397
+ Hs
+ Hs
+ Sc
+ Sc
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024