HitPredict

Interactor 1: SN114 (P36048)
Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
Gene: SNU114

Interactor 2: LSM1 (P47017)
Sm-like protein LSm1 (SPB8 protein)
Gene: LSM1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.43	1.00	0.656

Property	Details
Experiments	10900456
Identification Methods	two hybrid
Interaction Type	physical association, direct interaction

Property	Details
Interacting Pfam domains	GTP_EFTU~LSM
Common GO terms	GO:0005634 - nucleus GO:0005737 - cytoplasm
Homologous interactions	16

Homologous interactions

Color coding for hit scores

	1 1008 Sc			1 172
+	Hs
		167690 U5S1_HUMAN (2-1007): 0: 898: 31.43		LSM1_HUMAN (38-164): 1.07e-33: 117: 36.22
+	Hs
		321402 U5S1_HUMAN (2-1007): 0: 898: 31.43		LSM8_HUMAN (43-135): 8.57e-29: 104: 32.98
+	Hs
		927954 U5S1_HUMAN (2-1007): 0: 898: 31.43		RSMN_HUMAN (42-118): 8.26e-24: 95.1: 28.24
+	Sc
		731750 SN114_YEAST (1-1008): 0: 895: 100.00		LSM7_YEAST (8-119): 4.92e-26: 97.5: 27.97
+	Hs
		538964 U5S1_HUMAN (2-1007): 0: 898: 31.43		RSMB_HUMAN (42-118): 3e-23: 93.6: 28.24
+	Hs
		912044 U5S1_HUMAN (2-1007): 0: 898: 31.43		RUXG_HUMAN (41-117): 5.65e-24: 90.9: 28.57
+	Hs
		1064819 U5S1_HUMAN (2-1007): 0: 898: 31.43		LSM7_HUMAN (27-117): 7.88e-23: 89: 22.34
+	Hs
		68421 U5S1_HUMAN (2-1007): 0: 898: 31.43		RUXGL_HUMAN (41-117): 5.51e-21: 83.2: 27.27
+	Sc
		731740 SN114_YEAST (1-1008): 0: 895: 100.00		LSM8_YEAST (43-150): 4.47e-21: 84.7: 18.52
+	Sc
		731728 SN114_YEAST (1-1008): 0: 895: 100.00		RSMB_YEAST (35-153): 5.78e-20: 84: 21.32
+	Sc
		731753 SN114_YEAST (1-1008): 0: 895: 100.00		LSM3_YEAST (46-120): 1.16e-19: 80.2: 29.87
+	Sc
		731731 SN114_YEAST (1-1008): 0: 895: 100.00		RUXG_YEAST (40-117): 4.06e-19: 78.6: 25.32
+	Sp
		292950 SN114_SCHPO (1-1007): 0: 841: 32.82		RSMB_SCHPO (42-113): 2.97e-22: 88.6: 30.77
+	Sp
		252592 SN114_SCHPO (1-1007): 0: 841: 32.82		RUXG_SCHPO (43-117): 3.07e-20: 81.3: 30.67
+	Zm
		5855 A0A1D6E4M0_MAIZE (131-958): 0: 560: 17.65		B4FMM6_MAIZE (43-116): 1.66e-20: 82.1: 29.73
+	Sc
		810526 RIA1_YEAST (117-482): 3.67e-102: 347: 22.01		LSM1_YEAST (1-172): 4.98e-64: 196: 100.00