HitPredict

Interactor 1: LSM4 (P40070)
U6 snRNA-associated Sm-like protein LSm4 (Like-SM protein 4)
Gene: LSM4

Interactor 2: LSM7 (P53905)
U6 snRNA-associated Sm-like protein LSm7
Gene: LSM7

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.91 1.00 0.955

The method score is based on:

Property Details
Experiments 10428970, 10688190, 11805826, 16554755, 37968396, 16429126
Identification Methods two hybrid, coimmunoprecipitation, tandem affinity purification, affinity chromatography technology
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
and 10 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 187
Sc

1 115
+ Sc
+ Hs
+ Hs
+ Hs
+ Sc
+ Dm
+ Sc
+ Sc
+ Hs
+ Hs
+ Dm
+ Dm
+ Ce
+ Dm
+ Dm
+ Hs
+ Dm
+ Hs
+ Hs
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024