HitPredict

Interactor 1: SGN1 (P40561)
RNA-binding protein SGN1
Gene: SGN1

Interactor 2: YG5B (P53316)
Uncharacterized RNA-binding protein YGR250C
Gene: YGR250C

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.95	1.00	0.976

Property	Details
Experiments	10688190, 11805837, 11805826, 16554755, 18467557, 37638885, 37968396, 16429126, 18719252
Identification Methods	two hybrid, anti tag coimmunoprecipitation, tandem affinity purification, affinity chromatography technology, protein complementation assay, dihydrofolate reductase reconstruction
Interaction Type	physical association, direct interaction, association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0005634 - nucleus GO:0005737 - cytoplasm
Homologous interactions	18

Homologous interactions

Color coding for hit scores

	1 250 Sc			1 781
+	Sc
		376874 PABP_YEAST (48-148): 2.54e-19: 88.7: 24.51		YG5B_YEAST (1-781): 1.61e-148: 455: 100.00
+	Sc
		376818 SGN1_YEAST (1-250): 2.4e-57: 184: 100.00		PABP_YEAST (45-603): 9.27e-48: 180: 15.16
+	Zm
		8143 A0A1D6ELH4_MAIZE (40-152): 2.14e-18: 86: 18.42		A0A1D6ELH4_MAIZE (9-547): 1.12e-54: 201: 12.93
+	Sc
		376562 PABP_YEAST (48-148): 2.54e-19: 88.7: 24.51		PABP_YEAST (45-603): 9.27e-48: 180: 15.16
+	Hs
		1199032 PABP2_HUMAN (1-203): 2.78e-34: 126: 25.12		PABP5_HUMAN (339-667): 1.08e-35: 141: 15.81
+	Hs
		516576 PABP2_HUMAN (1-203): 2.78e-34: 126: 25.12		PABP1_HUMAN (325-653): 3.01e-34: 141: 17.33
+	Sp
		145447 PAB2_SCHPO (1-147): 8.44e-37: 129: 31.76		PABP_SCHPO (8-345): 1e-30: 130: 12.22
+	Hs
		474021 PABP4_HUMAN (25-152): 1.61e-21: 94.8: 17.05		PAB4L_HUMAN (332-652): 3.39e-41: 156: 16.20
+	Hs
		703438 CSTFT_HUMAN (64-139): 6.82e-27: 110: 41.56		CSTF2_HUMAN (196-280): 4.61e-30: 127: 34.12
+	Hs
		516495 PABP4_HUMAN (25-152): 1.61e-21: 94.8: 17.05		PABP1_HUMAN (325-653): 3.01e-34: 141: 17.33
+	Hs
		1119141 PAP1L_HUMAN (25-152): 4.71e-21: 93.7: 15.50		PABP5_HUMAN (339-667): 1.08e-35: 141: 15.81
+	Hs
		516339 PABP1_HUMAN (25-152): 1.06e-20: 92.5: 18.61		PABP1_HUMAN (325-653): 3.01e-34: 141: 17.33
+	Hs
		516635 PABP1_HUMAN (25-152): 1.06e-20: 92.5: 18.61		PABP5_HUMAN (339-667): 1.08e-35: 141: 15.81
+	Hs
		516689 PABP1_HUMAN (25-152): 1.06e-20: 92.5: 18.61		PABP3_HUMAN (325-653): 3.84e-34: 141: 16.11
+	Hs
		703388 CSTF2_HUMAN (64-139): 1.52e-25: 106: 41.56		ELAV1_HUMAN (166-277): 4.55e-24: 105: 21.05
+	Hs
		1031344 PABP4_HUMAN (25-152): 1.61e-21: 94.8: 17.05		ELAV1_HUMAN (166-277): 4.55e-24: 105: 21.05
+	Hs
		1020249 PABP4_HUMAN (25-152): 1.61e-21: 94.8: 17.05		ELAV2_HUMAN (418-779): 1.91e-21: 98.7: 13.22
+	Hs
		516484 PABP1_HUMAN (25-152): 1.06e-20: 92.5: 18.61		ELAV2_HUMAN (418-779): 1.91e-21: 98.7: 13.22