Interactor 1: LSM8 (P47093)
U6 snRNA-associated Sm-like protein LSm8
Gene: LSM8

Interactor 2: LSM3 (P57743)
U6 snRNA-associated Sm-like protein LSm3 (SmX4 protein)
Gene: LSM3

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.89 1.00 0.945

The method score is based on:

Property Details
Experiments 10428970, 10747033, 10900456, 18719252, 19740761, 37968396
Identification Methods two hybrid, biochemical, affinity chromatography technology
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0005688 - U6 snRNP
GO:0005730 - nucleolus
and 6 others

more...

Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 109
Sc

1 89
+ Sc
+ At
+ Sc
+ Sc
+ Sc
+ Hs
+ Hs
+ Hs
+ Sc
+ Hs
+ Dm
+ Hs
+ Mm
+ Sc
+ Sc
+ Dm
+ Hs
+ Hs
+ Sc
+ Dm

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024