HitPredict

Interactor 1: HAS1 (Q03532)
ATP-dependent RNA helicase HAS1 (EC 3.6.4.13) (Helicase associated with SET1 protein 1)
Gene: HAS1

Interactor 2: RRP5 (Q05022)
rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5) (U3 small nucleolar RNA-associated protein RRP5) (U3 snoRNA-associated protein RRP5)
Gene: RRP5

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.93 0.60 0.748

The method score is based on:

Property Details
Experiments 31511893, 16554755, 16429126, 27280440, 37968396, 22319211, 23209026, 23788678
Identification Methods affinity chromatography technology, pull down, tandem affinity purification
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0003723 - RNA binding
GO:0005730 - nucleolus
GO:0006364 - rRNA processing
GO:0030490 - maturation of SSU-rRNA
GO:0030686 - 90S preribosome
and 1 others

more...
Homologous interactions 12

Homologous interactions

Color coding for hit scores

1 505
Sc

1 1729
+ Sc
+ Sc
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+ Hs
+ Hs
+ Hs
+ Hs
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+ Hs
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024