HitPredict

Interactor 1: PRP42 (Q03776)
U1 small nuclear ribonucleoprotein component PRP42 (U1 snRNP protein PRP42) (65 kDa snRNP protein) (Pre-mRNA-processing factor 42)
Gene: PRP42

Interactor 2: RU1C (Q05900)
U1 small nuclear ribonucleoprotein C (U1 snRNP C) (U1-C) (U1C)
Gene: YHC1

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.84	0.60	0.712

The method score is based on:

Property	Details
Experiments	11805826, 34349264, 37968396, 16429126, 29051543
Identification Methods	tandem affinity purification, affinity chromatography technology
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000243 - commitment complex GO:0000395 - mRNA 5'-splice site recognition GO:0000398 - mRNA splicing, via spliceosome GO:0005634 - nucleus GO:0005681 - spliceosomal complex and 3 others more... GO:0005685 - U1 snRNP GO:0030627 - pre-mRNA 5'-splice site binding GO:0071004 - U2-type prespliceosome
Homologous interactions	1

Homologous interactions

Color coding for hit scores

	1	544
Sc

1	231

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024