Interactor 1: RRP45 (Q05636)
Exosome complex component RRP45 (Ribosomal RNA-processing protein 45)
Gene: RRP45

Interactor 2: RRP40 (Q08285)
Exosome complex component RRP40 (Ribosomal RNA-processing protein 40)
Gene: RRP40

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.89 1.00 0.945

The method score is based on:

Property Details
Experiments 11805826, 16429126, 12837249, 16554755, 37968396, 14759368
Identification Methods tandem affinity purification, affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains RNase_PH~Rrp40_N
Common GO terms GO:0000176 - nuclear exosome (RNase complex)
GO:0000177 - cytoplasmic exosome (RNase complex)
GO:0000178 - exosome (RNase complex)
GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 - RNA binding
and 7 others

more...

Homologous interactions 11

Homologous interactions

Color coding for hit scores

1 305
Sc

1 240
+ Hs
+ Hs
+ Hs
+ Sc
+ Sp
+ Dm
+ Sc
+ At
+ Hs
+ At
+ Dm

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024