HitPredict

Interactor 1: Q09584 (Q09584)
U1 small nuclear ribonucleoprotein 70 kDa
Gene: rnp-7

Interactor 2: RSP6 (Q18409)
Probable splicing factor, arginine/serine-rich 6 (CeSRp20) (RNA-binding protein srp-1)
Gene: rsp-6

Species: Caenorhabditis elegans

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.48	1.00	0.698

Property	Details
Experiments	14704431
Identification Methods	two hybrid, two hybrid pooling approach
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1, RRM_1~U1snRNP70_N
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003729 - mRNA binding
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 332 Ce			1 179
+	At
		1114811 RU17_ARATH (5-286): 1.51e-46: 164: 36.88		SR30_ARATH (2-174): 1.94e-31: 115: 26.23
+	Hs
		516493 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		SRSF9_HUMAN (2-171): 6.45e-36: 126: 29.31
+	Hs
		516478 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		SRSF1_HUMAN (2-170): 8.03e-31: 113: 31.84
+	Hs
		516425 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		NCBP2_HUMAN (2-107): 6.1e-27: 101: 27.93
+	Hs
		853881 PABP4_HUMAN (95-331): 4.93e-38: 144: 16.46		NCBP2_HUMAN (2-107): 6.1e-27: 101: 27.93
+	At
		286435 RU17_ARATH (5-286): 1.51e-46: 164: 36.88		RSZ21_ARATH (3-78): 1.16e-18: 80.5: 52.63
+	Hs
		516495 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		PABP4_HUMAN (4-147): 8.65e-23: 96.1: 13.61
+	Hs
		516466 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		SRSF3_HUMAN (1-169): 1.06e-24: 95.7: 39.05
+	Hs
		516339 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		PABP1_HUMAN (4-146): 7.78e-22: 93.4: 14.38
+	Hs
		474021 PAB4L_HUMAN (31-280): 1.07e-38: 142: 12.55		PABP4_HUMAN (4-147): 8.65e-23: 96.1: 13.61
+	Hs
		474017 PAB4L_HUMAN (31-280): 1.07e-38: 142: 12.55		SRSF3_HUMAN (1-169): 1.06e-24: 95.7: 39.05
+	At
		286416 RU17_ARATH (5-286): 1.51e-46: 164: 36.88		RSZ22_ARATH (3-75): 9.76e-15: 70.5: 53.43
+	Hs
		516689 PABP3_HUMAN (95-331): 8.12e-36: 138: 15.64		PABP1_HUMAN (4-146): 7.78e-22: 93.4: 14.38
+	Mm
		665745 PABP1_MOUSE (95-331): 1.07e-38: 146: 16.87		TIA1_MOUSE (2-170): 8.95e-19: 83.8: 14.79
+	Hs
		516471 PABP1_HUMAN (95-331): 9.77e-39: 146: 16.87		TIAR_HUMAN (3-153): 2.4e-18: 82.7: 16.03
+	Hs
		441852 RU17_HUMAN (1-230): 4.5e-35: 134: 47.62		PABP1_HUMAN (4-146): 7.78e-22: 93.4: 14.38
+	Hs
		441896 RU17_HUMAN (1-230): 4.5e-35: 134: 47.62		TIA1_HUMAN (2-164): 2.29e-19: 85.7: 14.88
+	Mm
		857334 RU17_MOUSE (1-230): 1.89e-35: 135: 47.62		TIA1_MOUSE (2-170): 8.95e-19: 83.8: 14.79
+	Hs
		474020 PAB4L_HUMAN (31-280): 1.07e-38: 142: 12.55		SRSF6_HUMAN (4-115): 4.15e-12: 65.1: 33.93