Protein: CPSF
30-kDa cleavage and polyadenylation specificity factor 30 (EC 3.1.21.-) (Protein OXIDATIVE STRESS TOLERANT 6) (Zinc finger CCCH domain-containing protein 11) (AtC3H11)

Gene: CPSF, CPSF30
Organism: Arabidopsis thaliana
Interactions: 52
UniProt ID: A9LNK9

Gene Ontology (top 5):
GO:0000398 - mRNA splicing, via spliceosome
GO:0003677 - DNA binding
GO:0003723 - RNA binding
GO:0003729 - mRNA binding
GO:0004519 - endonuclease activity

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

69132

CPSF
30-kDa cleavage and polyadenylation specificity factor 30

4

4

Small-scale

0.896

High

69168

CPSF2
Cleavage and polyadenylation specificity factor subunit 2

3

8

Small-scale

0.665

High

69137

FIPS5
FIP1[V]-like protein

3

5

Small-scale

0.658

High

69165

CPSF1
Cleavage and polyadenylation specificity factor subunit 1

3

3

Small-scale

0.649

High

69143

PAPS2
Nuclear poly(A) polymerase 2

2

4

Small-scale

0.627

High

69149

CTF77
Cleavage stimulation factor subunit 77

2

1

Small-scale

0.605

High

69146

PAPS3
Nuclear poly(A) polymerase 3

2

4

Small-scale

0.590

High

69170

TCP23
Transcription factor TCP23

1

5

High-throughput

0.578

High

69154

TCP4
Transcription factor TCP4

1

2

High-throughput

0.573

High

69156

NFYA4
Nuclear transcription factor Y subunit A-4

1

1

High-throughput

0.573

High

69157

TCP14
Transcription factor TCP14

1

8

High-throughput

0.573

High

69163

TCP15
Transcription factor TCP15

1

8

High-throughput

0.573

High

69174

TCP13
Transcription factor TCP13

1

2

High-throughput

0.573

High

69180

CLP1
Protein CLP1 homolog

2

0

Small-scale

0.570

High

69147

BH109
Transcription factor bHLH109

1

1

High-throughput

0.560

High

69158

NFYA9
Nuclear transcription factor Y subunit A-9

1

1

High-throughput

0.560

High

69159

BLH4
BEL1-like homeodomain protein 4

1

1

High-throughput

0.560

High

69162

BH096
Transcription factor bHLH96

1

1

High-throughput

0.560

High

69164

HFR1
Transcription factor HFR1

1

2

High-throughput

0.560

High

69166

TCP5
Transcription factor TCP5

1

2

High-throughput

0.560

High

69169

APRR1
Two-component response regulator-like APRR1

1

1

High-throughput

0.560

High

69176

FHA2
FHA domain-containing protein FHA2

1

2

High-throughput

0.560

High

69177

GLK1
Transcription activator GLK1

1

2

High-throughput

0.560

High

69178

Q9SIZ5
Homeodomain-like superfamily protein

1

3

High-throughput

0.560

High

69182

C3H25
Zinc finger CCCH domain-containing protein 25

1

9

High-throughput

0.560

High

69139

MAK3
N-alpha-acetyltransferase MAK3

1

0

High-throughput

0.549

High

69142

RFI2
E3 ubiquitin-protein ligase RFI2

1

0

High-throughput

0.549

High

69136

F4K1A8
C2H2 and C2HC zinc fingers superfamily protein

1

1

High-throughput

0.541

High

69141

GRF1
Growth-regulating factor 1

1

1

High-throughput

0.541

High

69144

KNAT1
Homeobox protein knotted-1-like 1

1

1

High-throughput

0.541

High

69153

GRF2
Growth-regulating factor 2

1

1

High-throughput

0.541

High

69155

ARFS
Auxin response factor 19

1

1

High-throughput

0.541

High

69160

TCP8
Transcription factor TCP8

1

5

High-throughput

0.541

High

69167

TCP21
Transcription factor TCP21

1

5

High-throughput

0.541

High

69171

MIP1B
B-box domain protein 31

1

1

High-throughput

0.541

High

69172

Q9LXU1
Cell differentiation, Rcd1-like protein

1

3

High-throughput

0.541

High

69173

TCP16
Transcription factor TCP16

1

5

High-throughput

0.541

High

69179

BH094
Transcription factor bHLH94

1

1

High-throughput

0.541

High

69135

F4JI72
Homeodomain-like superfamily protein

1

0

High-throughput

0.518

High

69138

NAC98
Protein CUP-SHAPED COTYLEDON 2

1

0

High-throughput

0.518

High

69134

FIPS3
FIP1[III]-like protein

1

6

Small-scale

0.508

High

69145

PCFS4
Polyadenylation and cleavage factor homolog 4

1

1

Small-scale

0.508

High

69152

CTF50
Cleavage stimulation factor subunit 50

1

3

Small-scale

0.508

High

69161

PCFS1
Polyadenylation and cleavage factor homolog 1

1

1

Small-scale

0.508

High

69148

BH153
Transcription factor bHLH153

1

2

High-throughput

0.494

High

69151

CFIS2
Pre-mRNA cleavage factor Im 25 kDa subunit 2

1

0

Small-scale

0.486

High

69175

GEML1
GEM-like protein 1

1

0

Small-scale

0.460

High

69150

CPS3B
Cleavage and polyadenylation specificity factor subunit 3-II

1

8

Small-scale

0.457

High

69133

C0SUZ3
BZIP family transcription factor

1

0

High-throughput

0.292

High

69140

O80748
B-box zinc finger family protein

1

0

High-throughput

0.292

High

69181

RBCMT
[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic

1

0

High-throughput

0.292

High


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Last updated: 15 Jul 2024