HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
317827	CPSF4 Cleavage and polyadenylation specificity factor subunit 4	4	4	High-throughput	0.895	High
1014197	WDR33 pre-mRNA 3' end processing protein WDR33	4	17	Small-scale	0.860	High
726776	FUS RNA-binding protein FUS	2	7	Small-scale	0.789	High
1014134	CPSF6 Cleavage and polyadenylation specificity factor subunit 6	2	5	High-throughput	0.789	High
1014109	CSTF3 Cleavage stimulation factor subunit 3	2	5	Small-scale	0.768	High
1014186	RBM14 RNA-binding protein 14	2	0	Small-scale	0.748	High
1014201	STPAP Speckle targeted PIP5K1A-regulated poly(A) polymerase	1	1	Small-scale	0.715	High
1014153	FIP1 Pre-mRNA 3'-end-processing factor FIP1	4	2	Small-scale	0.698	High
1014217	CPSF3 Cleavage and polyadenylation specificity factor subunit 3	4	8	Small-scale	0.694	High
446604	SNRPA U1 small nuclear ribonucleoprotein A	1	7	High-throughput	0.691	High
833873	CLK2 Dual specificity protein kinase CLK2	1	4	High-throughput	0.691	High
1014117	CUL3 Cullin-3	1	18	High-throughput	0.691	High
1014174	DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2	1	9	High-throughput	0.691	High
1014224	CILK1 Serine/threonine-protein kinase ICK	1	1	High-throughput	0.691	High
346635	MYC Myc proto-oncogene protein	4	5	Small-scale	0.676	High
1014177	SYMPK Symplekin	3	2	High-throughput	0.656	High
1014128	TAF5 Transcription initiation factor TFIID subunit 5	1	10	Small-scale	0.647	High
1014204	ANLN Anillin	3	2	High-throughput	0.640	High
1014211	CPSF2 Cleavage and polyadenylation specificity factor subunit 2	3	8	Small-scale	0.640	High
253256	KI21B Kinesin-like protein KIF21B	1	1	High-throughput	0.618	High
851472	NEK4 Serine/threonine-protein kinase Nek4	1	8	High-throughput	0.618	High
197009	PRP4 U4/U6 small nuclear ribonucleoprotein Prp4	1	11	High-throughput	0.618	High
268047	EED Polycomb protein EED	1	16	High-throughput	0.618	High
325707	LATS1 Serine/threonine-protein kinase LATS1	1	4	High-throughput	0.618	High
374124	RAF1 RAF proto-oncogene serine/threonine-protein kinase	1	3	High-throughput	0.618	High
442104	RU17 U1 small nuclear ribonucleoprotein 70 kDa	1	7	High-throughput	0.618	High
703376	CSTF2 Cleavage stimulation factor subunit 2	1	5	Small-scale	0.618	High
833421	RBM25 RNA-binding protein 25	1	3	High-throughput	0.618	High
841682	CDK9 Cyclin-dependent kinase 9	1	4	High-throughput	0.618	High
852027	ROA3 Heterogeneous nuclear ribonucleoprotein A3	1	2	Small-scale	0.618	High
925015	TRA2B Transformer-2 protein homolog beta	1	4	High-throughput	0.618	High
1014111	TADBP TAR DNA-binding protein 43	1	4	High-throughput	0.618	High
1014115	PRP4K Serine/threonine-protein kinase PRP4 homolog	1	10	High-throughput	0.618	High
1014118	CUL4A Cullin-4A	1	18	Small-scale	0.618	High
1014166	CPSF7 Cleavage and polyadenylation specificity factor subunit 7	1	2	High-throughput	0.618	High
1014173	PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4	1	1	High-throughput	0.618	High
1014178	RBP56 TATA-binding protein-associated factor 2N	1	7	Small-scale	0.618	High
1014187	PP1RA Serine/threonine-protein phosphatase 1 regulatory subunit 10	1	2	High-throughput	0.618	High
1014208	NLE1 Notchless protein homolog 1	1	7	High-throughput	0.618	High
1014222	FZR1 Fizzy-related protein homolog	1	12	High-throughput	0.618	High
1014209	WWOX WW domain-containing oxidoreductase	2	1	High-throughput	0.608	High
624876	RPB1 DNA-directed RNA polymerase II subunit RPB1	2	3	Small-scale	0.602	High
1014131	ELAV1 ELAV-like protein 1	1	0	Small-scale	0.586	High
843538	PAPOA Poly(A) polymerase alpha	2	4	Small-scale	0.585	High
552583	RFA2 Replication protein A 32 kDa subunit	2	2	High-throughput	0.584	High
651055	RFA1 Replication protein A 70 kDa DNA-binding subunit	2	2	High-throughput	0.584	High
720323	RFA3 Replication protein A 14 kDa subunit	2	2	High-throughput	0.584	High
1014135	HIF1A Hypoxia-inducible factor 1-alpha	2	7	Small-scale	0.584	High
1014159	RBBP6 E3 ubiquitin-protein ligase RBBP6	2	3	Small-scale	0.584	High
1012225	INCA1 Protein INCA1	2	0	High-throughput	0.580	High
1014124	RHG19 Rho GTPase-activating protein 19	2	7	High-throughput	0.571	High
1014151	RHGBA Rho GTPase-activating protein 11A	2	5	High-throughput	0.571	High
148732	CTRO Citron Rho-interacting kinase	1	7	High-throughput	0.553	High
1014123	CUL7 Cullin-7	1	2	High-throughput	0.553	High
981564	REL Proto-oncogene c-Rel	1	0	High-throughput	0.549	High
1014196	GLIS2 Zinc finger protein GLIS2	1	3	Small-scale	0.541	High
236755	CCNT1 Cyclin-T1	1	4	High-throughput	0.536	High
448629	RU1C U1 small nuclear ribonucleoprotein C	1	1	High-throughput	0.536	High
508479	TOP1 DNA topoisomerase 1	1	2	High-throughput	0.536	High
538925	RSMB Small nuclear ribonucleoprotein-associated proteins B and B'	1	3	High-throughput	0.536	High
996632	SSRP1 FACT complex subunit SSRP1	1	4	High-throughput	0.536	High
1014116	SNW1 SNW domain-containing protein 1	1	3	High-throughput	0.536	High
1014157	CSN6 COP9 signalosome complex subunit 6	1	1	High-throughput	0.536	High
1014203	SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	1	2	High-throughput	0.536	High
1014212	HDAC6 Histone deacetylase 6	1	11	High-throughput	0.536	High
322530	STAU1 Double-stranded RNA-binding protein Staufen homolog 1	2	4	High-throughput	0.533	High
1014161	ZCH18 Zinc finger CCCH domain-containing protein 18	2	7	High-throughput	0.533	High
1014138	RHG29 Rho GTPase-activating protein 29	2	5	High-throughput	0.521	High
1014132	EZH2 Histone-lysine N-methyltransferase EZH2	1	8	High-throughput	0.515	High
418211	NPM Nucleophosmin	1	0	Small-scale	0.513	High
1014148	CDC73 Parafibromin	1	0	Small-scale	0.513	High
1014164	HSC20 Iron-sulfur cluster co-chaperone protein HscB	1	0	High-throughput	0.513	High
820898	PRC2A Protein PRRC2A	1	4	Small-scale	0.508	High
475673	UBC Polyubiquitin-C [Cleaved into: Ubiquitin]	1	4	High-throughput	0.501	High
808107	NEDD4 E3 ubiquitin-protein ligase NEDD4	1	5	High-throughput	0.501	High
1014133	TAF12 Transcription initiation factor TFIID subunit 12	1	1	Small-scale	0.501	High
1014195	CPEB1 Cytoplasmic polyadenylation element-binding protein 1	1	2	High-throughput	0.500	High
942041	RPP38 Ribonuclease P protein subunit p38	1	0	High-throughput	0.493	High
1014170	ARRD2 Arrestin domain-containing protein 2	1	2	High-throughput	0.489	High
1014182	ARRD3 Arrestin domain-containing protein 3	1	2	High-throughput	0.489	High
1014129	TAF7 Transcription initiation factor TFIID subunit 7	1	0	Small-scale	0.480	High
125413	WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2	1	5	High-throughput	0.479	High
205327	TGON2 Trans-Golgi network integral membrane protein 2	1	2	High-throughput	0.479	High
227288	PRKN E3 ubiquitin-protein ligase parkin	1	6	High-throughput	0.479	High
233404	NUPR1 Nuclear protein 1	1	1	High-throughput	0.479	High
241514	H2B1K Histone H2B type 1-K	1	5	High-throughput	0.479	High
244349	BRD4 Bromodomain-containing protein 4	1	9	High-throughput	0.479	High
261486	NCOR1 Nuclear receptor corepressor 1	1	4	High-throughput	0.479	High
263607	PR40A Pre-mRNA-processing factor 40 homolog A	1	12	High-throughput	0.479	High
269225	WBP4 WW domain-binding protein 4	1	7	High-throughput	0.479	High
298465	UFL1 E3 UFM1-protein ligase 1	1	2	High-throughput	0.479	High
300416	PCF11 Pre-mRNA cleavage complex 2 protein Pcf11	1	2	High-throughput	0.479	High
304141	UBR5 E3 ubiquitin-protein ligase UBR5	1	8	High-throughput	0.479	High
308653	KI20A Kinesin-like protein KIF20A	1	11	High-throughput	0.479	High
379335	MYCN N-myc proto-oncogene protein	1	6	High-throughput	0.479	High
486900	MYBB Myb-related protein B	1	3	High-throughput	0.479	High
487376	ANDR Androgen receptor	1	5	High-throughput	0.479	High
503977	HSP7C Heat shock cognate 71 kDa protein	1	2	High-throughput	0.479	High
632708	TYY1 Transcriptional repressor protein YY1	1	5	High-throughput	0.479	High
764637	CUX1 Homeobox protein cut-like 1	1	1	High-throughput	0.479	High
779308	CCNF Cyclin-F	1	2	High-throughput	0.479	High
897235	CSN2 COP9 signalosome complex subunit 2	1	4	Small-scale	0.479	High
908448	UBE2H Ubiquitin-conjugating enzyme E2 H	1	3	High-throughput	0.479	High
917172	H4 Histone H4	1	4	High-throughput	0.479	High
918320	H2B1C Histone H2B type 1-C/E/F/G/I	1	5	High-throughput	0.479	High
959375	VIGLN Vigilin	1	4	High-throughput	0.479	High
961075	HSF1 Heat shock factor protein 1	1	2	High-throughput	0.479	High
969649	KIF23 Kinesin-like protein KIF23	1	8	High-throughput	0.479	High
998611	EP300 Histone acetyltransferase p300	1	10	High-throughput	0.479	High
1014110	CSN1 COP9 signalosome complex subunit 1	1	4	Small-scale	0.479	High
1014112	IKZF1 DNA-binding protein Ikaros	1	5	High-throughput	0.479	High
1014113	FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5	1	3	High-throughput	0.479	High
1014114	BIRC3 Baculoviral IAP repeat-containing protein 3	1	2	High-throughput	0.479	High
1014119	WRN Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN	1	5	High-throughput	0.479	High
1014120	TRIPC E3 ubiquitin-protein ligase TRIP12	1	8	High-throughput	0.479	High
1014125	TNIP1 TNFAIP3-interacting protein 1	1	8	High-throughput	0.479	High
1014126	KIF14 Kinesin-like protein KIF14	1	4	High-throughput	0.479	High
1014130	NCOA2 Nuclear receptor coactivator 2	1	7	High-throughput	0.479	High
1014141	ZN362 Zinc finger protein 362	1	3	High-throughput	0.479	High
1014143	BRE1A E3 ubiquitin-protein ligase BRE1A	1	4	High-throughput	0.479	High
1014145	TSH3 Teashirt homolog 3	1	1	High-throughput	0.479	High
1014147	VIR Protein virilizer homolog	1	2	High-throughput	0.479	High
1014152	ZC3HE Zinc finger CCCH domain-containing protein 14	1	2	High-throughput	0.479	High
1014156	HAKAI E3 ubiquitin-protein ligase Hakai	1	1	High-throughput	0.479	High
1014158	PARPT Protein mono-ADP-ribosyltransferase TIPARP	1	1	High-throughput	0.479	High
1014160	SLN11 Schlafen family member 11	1	2	Small-scale	0.479	High
1014162	DDX42 ATP-dependent RNA helicase DDX42	1	2	High-throughput	0.479	High
1014163	SIAH1 E3 ubiquitin-protein ligase SIAH1	1	1	Small-scale	0.479	High
1014165	SRRM1 Serine/arginine repetitive matrix protein 1	1	4	High-throughput	0.479	High
1014167	FBX22 F-box only protein 22	1	1	High-throughput	0.479	High
1014168	ARI1B AT-rich interactive domain-containing protein 1B	1	2	High-throughput	0.479	High
1014171	SP7 Transcription factor Sp7	1	4	High-throughput	0.479	High
1014172	DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	1	High-throughput	0.479	High
1014175	ESR2 Estrogen receptor beta	1	5	High-throughput	0.479	High
1014176	KAT6A Histone acetyltransferase KAT6A	1	2	High-throughput	0.479	High
1014179	CSN5 COP9 signalosome complex subunit 5	1	3	Small-scale	0.479	High
1014181	FUBP1 Far upstream element-binding protein 1	1	2	High-throughput	0.479	High
1014184	ZBT10 Zinc finger and BTB domain-containing protein 10	1	3	High-throughput	0.479	High
1014190	ANM1 Protein arginine N-methyltransferase 1	1	3	High-throughput	0.479	High
1014191	HNRL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1	1	1	Small-scale	0.479	High
1014193	FACD2 Fanconi anemia group D2 protein	1	5	High-throughput	0.479	High
1014198	NSRP1 Nuclear speckle splicing regulatory protein 1	1	1	High-throughput	0.479	High
1014199	SMRCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	1	9	High-throughput	0.479	High
1014205	SIR7 NAD-dependent protein deacetylase sirtuin-7	1	5	High-throughput	0.479	High
1014207	SALL1 Sal-like protein 1	1	3	High-throughput	0.479	High
1014213	ZRAN1 Ubiquitin thioesterase ZRANB1	1	3	High-throughput	0.479	High
1014214	TCF20 Transcription factor 20	1	1	High-throughput	0.479	High
1014218	GPTC8 G patch domain-containing protein 8	1	1	High-throughput	0.479	High
1014219	IKZF3 Zinc finger protein Aiolos	1	6	High-throughput	0.479	High
1014220	ZBT21 Zinc finger and BTB domain-containing protein 21	1	2	High-throughput	0.479	High
1014221	YETS2 YEATS domain-containing protein 2	1	1	High-throughput	0.479	High
1014223	MYO6 Unconventional myosin-VI	1	1	High-throughput	0.479	High
1014225	ZN148 Zinc finger protein 148	1	4	High-throughput	0.479	High
1014226	NUDC Nuclear migration protein nudC	1	4	High-throughput	0.479	High
1014183	DDT4L DNA damage-inducible transcript 4-like protein	1	1	High-throughput	0.470	High
122703	MEN1 Menin	1	0	High-throughput	0.458	High
202427	PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3	1	0	High-throughput	0.458	High
396924	HMGN1 Non-histone chromosomal protein HMG-14	1	0	High-throughput	0.458	High
416974	IF4E Eukaryotic translation initiation factor 4E	1	0	Small-scale	0.458	High
589846	TBP TATA-box-binding protein	1	0	Small-scale	0.458	High
827921	UB2R1 Ubiquitin-conjugating enzyme E2 R1	1	0	High-throughput	0.458	High
940687	NOP14 Nucleolar protein 14	1	0	High-throughput	0.458	High
1014108	ILF2 Interleukin enhancer-binding factor 2	1	0	Small-scale	0.458	High
1014142	BEND3 BEN domain-containing protein 3	1	0	High-throughput	0.458	High
1014150	MED27 Mediator of RNA polymerase II transcription subunit 27	1	0	High-throughput	0.458	High
1014169	TNIP2 TNFAIP3-interacting protein 2	1	0	High-throughput	0.458	High
1014180	FBX32 F-box only protein 32	1	0	High-throughput	0.458	High
1014189	WRIP1 ATPase WRNIP1	1	0	High-throughput	0.458	High
1014206	RAD18 E3 ubiquitin-protein ligase RAD18	1	0	High-throughput	0.458	High
1014215	DACH1 Dachshund homolog 1	1	0	High-throughput	0.458	High
717757	BMI1 Polycomb complex protein BMI-1	1	5	High-throughput	0.445	High
1014122	CASP8 Caspase-8	1	2	High-throughput	0.445	High
1014127	PCBP2 Poly(rC)-binding protein 2	1	4	Small-scale	0.445	High
1014139	NCBP3 Nuclear cap-binding protein subunit 3	1	1	High-throughput	0.445	High
1014202	LN28A Protein lin-28 homolog A	1	2	High-throughput	0.445	High
1014216	DDX41 Probable ATP-dependent RNA helicase DDX41	1	3	High-throughput	0.445	High
255724	OBSL1 Obscurin-like protein 1	1	2	High-throughput	0.437	High
384729	NTRK1 High affinity nerve growth factor receptor	1	2	High-throughput	0.437	High
932120	ACTC Actin, alpha cardiac muscle 1	1	1	High-throughput	0.437	High
1014136	QSER1 Glutamine and serine-rich protein 1	1	4	High-throughput	0.437	High
1014144	RN123 E3 ubiquitin-protein ligase RNF123	1	1	High-throughput	0.437	High
1014155	TRI67 Tripartite motif-containing protein 67	1	5	High-throughput	0.437	High
1014192	LGR4 Leucine-rich repeat-containing G-protein coupled receptor 4	1	1	High-throughput	0.437	High
1014200	PKHA4 Pleckstrin homology domain-containing family A member 4	1	6	High-throughput	0.437	High
1014188	NUDC1 NudC domain-containing protein 1	1	0	High-throughput	0.426	High
306136	GBRAP Gamma-aminobutyric acid receptor-associated protein	1	5	High-throughput	0.407	High
1014154	NBEL2 Neurobeachin-like protein 2	1	10	High-throughput	0.407	High
1014185	C170L Cep170-like protein	1	1	High-throughput	0.407	High
1014194	SHAN3 SH3 and multiple ankyrin repeat domains protein 3	1	2	High-throughput	0.407	High
1014227	CSAG2 Chondrosarcoma-associated gene 2/3 protein	1	4	High-throughput	0.407	High
847453	BAP31 B-cell receptor-associated protein 31	1	0	High-throughput	0.249	Low
1014121	GSE1 Genetic suppressor element 1	1	0	High-throughput	0.249	Low
1014137	CL16A Protein CLEC16A	1	0	High-throughput	0.249	Low
1014140	FA76B Protein FAM76B	1	0	High-throughput	0.249	Low
1014149	CH082 UPF0598 protein C8orf82	1	0	High-throughput	0.249	Low
1014210	KCMF1 E3 ubiquitin-protein ligase KCMF1	1	0	High-throughput	0.249	Low
1014146	CP135 Centrosomal protein of 135 kDa	1	0	High-throughput	0.232	Low