Protein: SCAFB
Protein SCAF11 (CTD-associated SR protein 11) (Renal carcinoma antigen NY-REN-40) (SC35-interacting protein 1) (SR-related and CTD-associated factor 11) (SRSF2-interacting protein) (Serine/arginine-rich splicing factor 2-interacting protein) (Splicing factor, arginine/serine-rich 2-interacting protein) (Splicing regulatory protein 129) (SRrp129)

Gene: SCAFB, SCAF11
Organism: Homo sapiens
Interactions: 124
UniProt ID: Q99590

Gene Ontology (top 5):
GO:0000245 - spliceosomal complex assembly
GO:0000375 - RNA splicing, via transesterification reactions
GO:0003723 - RNA binding
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

641907

U2AF2
Splicing factor U2AF 65 kDa subunit

5

12

Small-scale

0.723

High

1304771

LC7L2
Putative RNA-binding protein Luc7-like 2

3

3

High-throughput

0.667

High

963260

U2AF1
Splicing factor U2AF 35 kDa subunit

2

2

High-throughput

0.628

High

1157365

JMJD6
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

2

4

High-throughput

0.628

High

992900

SRSF1
Serine/arginine-rich splicing factor 1

2

20

Small-scale

0.614

High

124061

SPT5H
Transcription elongation factor SPT5

2

7

High-throughput

0.611

High

1304761

ANM8
Protein arginine N-methyltransferase 8

3

3

High-throughput

0.609

High

331403

APBA3
Amyloid-beta A4 precursor protein-binding family A member 3

2

5

High-throughput

0.574

High

1256534

TP4AP
Short transient receptor potential channel 4-associated protein

2

1

High-throughput

0.574

High

370278

ESR1
Estrogen receptor

2

20

High-throughput

0.571

High

442422

RU17
U1 small nuclear ribonucleoprotein 70 kDa

1

14

High-throughput

0.536

High

446761

SNRPA
U1 small nuclear ribonucleoprotein A

1

9

High-throughput

0.536

High

448791

RU1C
U1 small nuclear ribonucleoprotein C

1

2

High-throughput

0.536

High

508676

TOP1
DNA topoisomerase 1

1

5

High-throughput

0.536

High

539120

RSMB
Small nuclear ribonucleoprotein-associated proteins B and B'

1

5

High-throughput

0.536

High

565012

HMGA1
High mobility group protein HMG-I/HMG-Y

1

4

High-throughput

0.536

High

759792

RS19
Small ribosomal subunit protein eS19

1

1

High-throughput

0.536

High

801332

KI67
Proliferation marker protein Ki-67

1

15

High-throughput

0.536

High

824665

MAPK2
MAP kinase-activated protein kinase 2

1

1

High-throughput

0.536

High

854458

RPB11
DNA-directed RNA polymerase II subunit RPB11-a

1

2

High-throughput

0.536

High

905030

1433G
14-3-3 protein gamma

1

11

High-throughput

0.536

High

909953

1433E
14-3-3 protein epsilon

1

1

High-throughput

0.536

High

911944

RUXF
Small nuclear ribonucleoprotein F

1

2

High-throughput

0.536

High

927449

1433Z
14-3-3 protein zeta/delta

1

11

High-throughput

0.536

High

942896

SRPK2
SRSF protein kinase 2

1

20

High-throughput

0.536

High

948835

HMGN5
High mobility group nucleosome-binding domain-containing protein 5

1

2

High-throughput

0.536

High

996855

SSRP1
FACT complex subunit SSRP1

1

13

High-throughput

0.536

High

1028784

SRSF5
Serine/arginine-rich splicing factor 5

1

20

High-throughput

0.536

High

1029053

SRSF6
Serine/arginine-rich splicing factor 6

1

20

High-throughput

0.536

High

1043180

CUL4A
Cullin-4A

1

11

High-throughput

0.536

High

1084587

CPSF6
Cleavage and polyadenylation specificity factor subunit 6

1

11

High-throughput

0.536

High

1087362

H2B2E
Histone H2B type 2-E

1

20

High-throughput

0.536

High

1204924

ZN677
Zinc finger protein 677

1

2

High-throughput

0.536

High

1246015

NEDD1
Protein NEDD1

1

13

High-throughput

0.536

High

1271099

EZH1
Histone-lysine N-methyltransferase EZH1

1

8

High-throughput

0.536

High

1304751

GCP2
Gamma-tubulin complex component 2

1

4

High-throughput

0.536

High

1304766

ZNFX1
NFX1-type zinc finger-containing protein 1

1

1

High-throughput

0.536

High

1304770

SRPK3
SRSF protein kinase 3

1

20

High-throughput

0.536

High

266051

PSIP1
PC4 and SFRS1-interacting protein

1

5

High-throughput

0.515

High

246126

RNH1
Ribonuclease H1

1

0

High-throughput

0.513

High

446432

RM03
Large ribosomal subunit protein uL3m

1

0

High-throughput

0.513

High

877850

FOXA1
Hepatocyte nuclear factor 3-alpha

1

0

High-throughput

0.513

High

887601

APC15
Anaphase-promoting complex subunit 15

1

0

High-throughput

0.513

High

1159880

MZT2A
Mitotic-spindle organizing protein 2A

1

0

High-throughput

0.513

High

902731

SUMO2
Small ubiquitin-related modifier 2

1

3

High-throughput

0.501

High

260599

TP4A3
Protein tyrosine phosphatase type IVA 3

1

7

High-throughput

0.489

High

330401

CX001
Putative transmembrane protein CXorf1

1

1

High-throughput

0.489

High

518462

ADT3
ADP/ATP translocase 3

1

1

High-throughput

0.489

High

614112

TBG1
Tubulin gamma-1 chain

1

2

High-throughput

0.489

High

648588

CALL3
Calmodulin-like protein 3

1

1

High-throughput

0.489

High

995429

LG3BP
Galectin-3-binding protein

1

5

High-throughput

0.489

High

997303

MZT1
Mitotic-spindle organizing protein 1

1

1

High-throughput

0.489

High

1287564

GCP3
Gamma-tubulin complex component 3

1

4

High-throughput

0.489

High

1301475

GCP6
Gamma-tubulin complex component 6

1

4

High-throughput

0.489

High

1301495

GCP5
Gamma-tubulin complex component 5

1

4

High-throughput

0.489

High

1304768

GCP4
Gamma-tubulin complex component 4

1

4

High-throughput

0.489

High

1304773

TNPO3
Transportin-3

1

2

High-throughput

0.489

High

473555

ATX1L
Ataxin-1-like

1

4

High-throughput

0.481

High

952095

SRSF3
Serine/arginine-rich splicing factor 3

1

20

Small-scale

0.481

High

122958

MEN1
Menin

1

4

High-throughput

0.479

High

149208

CTRO
Citron Rho-interacting kinase

1

11

High-throughput

0.479

High

347689

MYC
Myc proto-oncogene protein

1

18

High-throughput

0.479

High

374747

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

7

High-throughput

0.479

High

379772

MYCN
N-myc proto-oncogene protein

1

17

High-throughput

0.479

High

443236

NFIC
Nuclear factor 1 C-type

1

8

High-throughput

0.479

High

453564

ROA1
Heterogeneous nuclear ribonucleoprotein A1

1

9

High-throughput

0.479

High

455792

PARP1
Poly [ADP-ribose] polymerase 1

1

13

High-throughput

0.479

High

489223

H14
Histone H1.4

1

12

High-throughput

0.479

High

523958

XRCC6
X-ray repair cross-complementing protein 6

1

9

High-throughput

0.479

High

583559

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

5

High-throughput

0.479

High

652970

APEX1
DNA repair nuclease/redox regulator APEX1

1

2

High-throughput

0.479

High

718132

BMI1
Polycomb complex protein BMI-1

1

9

High-throughput

0.479

High

722493

RL22
Large ribosomal subunit protein eL22

1

1

High-throughput

0.479

High

842623

RL14
Large ribosomal subunit protein eL14

1

1

High-throughput

0.479

High

917802

H4
Histone H4

1

9

High-throughput

0.479

High

918635

H2B1C
Histone H2B type 1-C/E/F/G/I

1

20

High-throughput

0.479

High

935158

H31
Histone H3.1

1

13

High-throughput

0.479

High

952580

H33
Histone H3.3

1

13

High-throughput

0.479

High

967952

PO5F1
POU domain, class 5, transcription factor 1

1

1

High-throughput

0.479

High

1018656

CHD3
Chromodomain-helicase-DNA-binding protein 3

1

9

High-throughput

0.479

High

1055462

DHX8
ATP-dependent RNA helicase DHX8

1

10

High-throughput

0.479

High

1059819

CHD4
Chromodomain-helicase-DNA-binding protein 4

1

8

High-throughput

0.479

High

1063578

SUZ12
Polycomb protein SUZ12

1

1

High-throughput

0.479

High

1064629

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

4

High-throughput

0.479

High

1167294

BCOR
BCL-6 corepressor

1

17

High-throughput

0.479

High

1183760

DPPA4
Developmental pluripotency-associated protein 4

1

3

High-throughput

0.479

High

1188769

PARPT
Protein mono-ADP-ribosyltransferase TIPARP

1

9

High-throughput

0.479

High

1221672

SMC5
Structural maintenance of chromosomes protein 5

1

9

High-throughput

0.479

High

1256353

DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific

1

4

High-throughput

0.479

High

1269444

ESR2
Estrogen receptor beta

1

20

High-throughput

0.479

High

1271171

RBP56
TATA-binding protein-associated factor 2N

1

10

High-throughput

0.479

High

1281340

FBXW7
F-box/WD repeat-containing protein 7

1

5

High-throughput

0.479

High

1288263

SNR40
U5 small nuclear ribonucleoprotein 40 kDa protein

1

17

High-throughput

0.479

High

1304749

BARD1
BRCA1-associated RING domain protein 1

1

14

High-throughput

0.479

High

1304750

ANM1
Protein arginine N-methyltransferase 1

1

3

High-throughput

0.479

High

1304752

DDX23
Probable ATP-dependent RNA helicase DDX23

1

10

High-throughput

0.479

High

1304755

KLF16
Krueppel-like factor 16

1

9

High-throughput

0.479

High

1304758

NANOG
Homeobox protein NANOG

1

10

High-throughput

0.479

High

1304760

ANLN
Anillin

1

8

High-throughput

0.479

High

1304762

SIR7
NAD-dependent protein deacetylase sirtuin-7

1

7

High-throughput

0.479

High

1304763

RAD18
E3 ubiquitin-protein ligase RAD18

1

4

High-throughput

0.479

High

1304764

TE2IP
Telomeric repeat-binding factor 2-interacting protein 1

1

6

High-throughput

0.479

High

1304767

ZRAN1
Ubiquitin thioesterase ZRANB1

1

13

High-throughput

0.479

High

1304769

HECD1
E3 ubiquitin-protein ligase HECTD1

1

16

High-throughput

0.479

High

1114415

LEGL
Galectin-related protein

1

1

High-throughput

0.470

High

776800

STAT3
Signal transducer and activator of transcription 3

1

0

High-throughput

0.460

High

973194

RL6
Large ribosomal subunit protein eL6

1

0

High-throughput

0.458

High

1304753

DDA1
DET1- and DDB1-associated protein 1

1

0

High-throughput

0.458

High

1304774

EID1
EP300-interacting inhibitor of differentiation 1

1

0

Small-scale

0.458

High

1304759

LN28A
Protein lin-28 homolog A

1

6

High-throughput

0.445

High

391859

H2A1B
Histone H2A type 1-B/E

1

9

High-throughput

0.437

High

1286670

CHM4C
Charged multivesicular body protein 4c

1

3

High-throughput

0.437

High

1304754

LGR4
Leucine-rich repeat-containing G-protein coupled receptor 4

1

1

High-throughput

0.437

High

1304756

PKHA4
Pleckstrin homology domain-containing family A member 4

1

9

High-throughput

0.437

High

416499

S10A9
Protein S100-A9

1

1

Small-scale

0.417

High

159674

QCR10
Cytochrome b-c1 complex subunit 10

1

0

High-throughput

0.279

Low

456187

IFI6
Interferon alpha-inducible protein 6

1

0

High-throughput

0.279

Low

611587

GNLY
Granulysin

1

0

High-throughput

0.279

Low

1231409

CT197
Putative uncharacterized protein encoded by LINC02910

1

0

High-throughput

0.279

Low

1244985

FDSCP
Follicular dendritic cell secreted peptide

1

0

High-throughput

0.279

Low

1285606

I27L1
Interferon alpha-inducible protein 27-like protein 1

1

0

High-throughput

0.279

Low

1304757

WDCP
WD repeat and coiled-coil-containing protein

1

0

High-throughput

0.279

Low

1304765

PEN2
Gamma-secretase subunit PEN-2

1

0

High-throughput

0.279

Low

1304772

NDK7
Nucleoside diphosphate kinase homolog 7

1

0

High-throughput

0.279

Low


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Last updated: 15 Jul 2024