Protein: GAR1
H/ACA ribonucleoprotein complex subunit GAR1 (Glycine/arginine-rich protein 1) (snoRNP protein GAR1)

Gene: GAR1
Organism: Saccharomyces cerevisiae S288C
Interactions: 167
UniProt ID: P28007

Gene Ontology (top 5):
GO:0000454 - snoRNA guided rRNA pseudouridine synthesis
GO:0005730 - nucleolus
GO:0031120 - snRNA pseudouridine synthesis
GO:0031429 - box H/ACA snoRNP complex
GO:0034513 - box H/ACA snoRNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

655825

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

12

2

Small-scale

0.981

High

655876

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

4

1

Small-scale

0.783

High

655812

GAR1
H/ACA ribonucleoprotein complex subunit GAR1

2

0

High-throughput

0.769

High

655818

NHP2
H/ACA ribonucleoprotein complex subunit NHP2

8

4

Small-scale

0.751

High

655921

NOP10
H/ACA ribonucleoprotein complex subunit NOP10

4

2

Small-scale

0.697

High

593505

DBP3
ATP-dependent RNA helicase DBP3

3

2

High-throughput

0.672

High

655906

NOP6
Nucleolar protein 6

4

0

Small-scale

0.657

High

655869

YG5X
Putative methyltransferase YGR283C

3

1

High-throughput

0.657

High

655866

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

3

0

High-throughput

0.641

High

141199

RS9A
Small ribosomal subunit protein uS4A

2

1

Small-scale

0.619

High

655891

HAS1
ATP-dependent RNA helicase HAS1

2

3

High-throughput

0.614

High

549345

FBRL
rRNA 2'-O-methyltransferase fibrillarin

2

2

Small-scale

0.612

High

655901

ESF1
Pre-rRNA-processing protein ESF1

2

1

High-throughput

0.601

High

655894

YM91
Putative methyltransferase YMR310C

3

1

High-throughput

0.599

High

655915

UTP23
rRNA-processing protein UTP23

2

0

High-throughput

0.588

High

655826

LHP1
La protein homolog

2

1

High-throughput

0.588

High

655837

NOP4
Nucleolar protein 4

2

1

High-throughput

0.588

High

655854

NOP2
25S rRNA

2

0

Small-scale

0.585

High

482125

RS18A
Small ribosomal subunit protein uS13A

2

1

Small-scale

0.565

High

655830

URB1
Nucleolar pre-ribosomal-associated protein 1

2

0

High-throughput

0.563

High

655832

UTP20
U3 small nucleolar RNA-associated protein 20

2

0

High-throughput

0.563

High

655893

PUF6
Pumilio homology domain family member 6

2

0

High-throughput

0.563

High

655919

RRP12
Ribosomal RNA-processing protein 12

2

0

High-throughput

0.563

High

655873

GIS2
Zinc finger protein GIS2

2

3

High-throughput

0.561

High

407484

RS9B
Small ribosomal subunit protein uS4B

1

1

Small-scale

0.550

High

655839

HMT1
Protein arginine N-methyltransferase 1

2

4

Small-scale

0.550

High

655887

RNT1
Ribonuclease 3

1

0

Small-scale

0.549

High

655859

NOP9
Nucleolar protein 9

2

0

Small-scale

0.547

High

655895

RRP5
rRNA biogenesis protein RRP5

2

0

High-throughput

0.547

High

597797

PWP1
Periodic tryptophan protein 1

1

1

High-throughput

0.541

High

648346

NSR1
Nuclear localization sequence-binding protein

1

2

High-throughput

0.541

High

655875

UBP10
Ubiquitin carboxyl-terminal hydrolase 10

1

5

High-throughput

0.541

High

655908

BRX1
Ribosome biogenesis protein BRX1

1

1

High-throughput

0.541

High

415907

DED1
ATP-dependent RNA helicase DED1

2

1

High-throughput

0.537

High

602318

DPOE
DNA polymerase epsilon catalytic subunit A

2

1

High-throughput

0.537

High

655847

IF4F2
Eukaryotic initiation factor 4F subunit p130

2

1

High-throughput

0.537

High

501330

RPA1
DNA-directed RNA polymerase I subunit RPA190

1

0

High-throughput

0.518

High

655819

SRP40
Suppressor protein SRP40

1

0

High-throughput

0.518

High

655843

LRP1
Exosome complex protein LRP1

1

0

High-throughput

0.518

High

655845

NOC2
Nucleolar complex protein 2

1

0

High-throughput

0.518

High

655857

LOC1
60S ribosomal subunit assembly/export protein LOC1

1

0

High-throughput

0.518

High

655868

PXR1
Protein PXR1

1

0

High-throughput

0.518

High

655890

TMA23
Protein TMA23

1

0

High-throughput

0.518

High

655900

FKBP4
FK506-binding protein 4

1

0

High-throughput

0.518

High

655860

LSM8
U6 snRNA-associated Sm-like protein LSm8

1

0

High-throughput

0.513

High

493365

HSP72
Heat shock protein SSA2

2

1

High-throughput

0.504

High

510488

SSB1
Ribosome-associated molecular chaperone SSB1

2

1

High-throughput

0.504

High

355378

H2B1
Histone H2B.1

1

1

Small-scale

0.502

High

355811

H2B2
Histone H2B.2

1

1

Small-scale

0.502

High

356295

H4
Histone H4

1

2

Small-scale

0.502

High

624038

DBP2
ATP-dependent RNA helicase DBP2

1

1

High-throughput

0.494

High

655855

KRI1
Protein KRI1

1

0

High-throughput

0.493

High

655904

TSR1
Ribosome biogenesis protein TSR1

1

0

High-throughput

0.493

High

655831

SPT7
Transcriptional activator SPT7

1

2

High-throughput

0.489

High

634517

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.479

High

638657

SPB4
ATP-dependent rRNA helicase SPB4

1

3

High-throughput

0.479

High

655835

DBP7
ATP-dependent RNA helicase DBP7

1

4

Small-scale

0.479

High

655851

AIR1
Protein AIR1

1

3

Small-scale

0.479

High

655853

RLP7
Ribosome biogenesis protein RLP7

1

1

High-throughput

0.479

High

655861

TRF5
Poly(A) RNA polymerase protein 1

1

2

Small-scale

0.479

High

655871

PAP2
Poly(A) RNA polymerase protein 2

1

2

Small-scale

0.479

High

655888

TOM1
E3 ubiquitin-protein ligase TOM1

1

1

High-throughput

0.479

High

655902

NOC4
Nucleolar complex protein 4

1

1

High-throughput

0.479

High

655912

MAK21
Ribosome biogenesis protein MAK21

1

1

High-throughput

0.479

High

655916

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

655917

AIR2
Protein AIR2

1

3

Small-scale

0.479

High

655918

NOP58
Nucleolar protein 58

1

1

High-throughput

0.479

High

655883

NOP3
Serine/arginine

1

4

Small-scale

0.464

High

407775

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

413350

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.458

High

479967

RS6A
Small ribosomal subunit protein eS6A

1

0

High-throughput

0.458

High

631716

RS2
Small ribosomal subunit protein uS5

1

0

High-throughput

0.458

High

645299

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

655841

ENP1
Essential nuclear protein 1

1

0

High-throughput

0.458

High

655856

UTP10
U3 small nucleolar RNA-associated protein 10

1

0

High-throughput

0.458

High

655877

NOP15
Ribosome biogenesis protein 15

1

0

High-throughput

0.458

High

655892

DHR1
Probable ATP-dependent RNA helicase DHR1

1

0

High-throughput

0.458

High

655898

UTP21
U3 small nucleolar RNA-associated protein 21

1

0

Small-scale

0.458

High

655907

RCL1
RNA 3'-terminal phosphate cyclase-like protein

1

0

Small-scale

0.458

High

655920

EFG1P
rRNA-processing protein EFG1

1

0

Small-scale

0.458

High

655881

SEN1
Helicase SEN1

1

1

Small-scale

0.445

High

655913

RL7B
Large ribosomal subunit protein uL30B

1

1

High-throughput

0.445

High

655820

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

1

1

Small-scale

0.439

High

392328

H2A2
Histone H2A.2

1

2

High-throughput

0.437

High

490529

HSP71
Heat shock protein SSA1

1

1

High-throughput

0.437

High

655815

RENT1
ATP-dependent helicase NAM7

1

1

Small-scale

0.437

High

655824

RSSA1
Small ribosomal subunit protein uS2A

1

2

High-throughput

0.437

High

655838

GBLP
Small ribosomal subunit protein RACK1

1

1

High-throughput

0.437

High

655846

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

1

High-throughput

0.437

High

655865

PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2

1

2

High-throughput

0.437

High

655880

NUM1
Nuclear migration protein NUM1

1

1

High-throughput

0.437

High

655897

HRQ1
ATP-dependent helicase HRQ1

1

2

Small-scale

0.437

High

655910

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.437

High

655911

NCBP2
Nuclear cap-binding protein subunit 2

1

1

High-throughput

0.437

High

655836

RPF2
Ribosome biogenesis protein RPF2

1

0

High-throughput

0.426

High

655874

JJJ1
J protein JJJ1

1

0

High-throughput

0.426

High

477969

HSP77
Import motor subunit, mitochondrial

1

1

High-throughput

0.407

High

482542

RS18B
Small ribosomal subunit protein uS13B

1

1

Small-scale

0.407

High

498823

RL4A
Large ribosomal subunit protein uL4A

1

1

High-throughput

0.407

High

534906

RL3
Large ribosomal subunit protein uL3

1

1

High-throughput

0.407

High

633917

GBP2
Serine/arginine

1

1

High-throughput

0.407

High

655814

RL8B
Large ribosomal subunit protein eL8B

1

4

High-throughput

0.407

High

655816

HS104
Heat shock protein 104

1

1

High-throughput

0.407

High

655821

HSP7F
Heat shock protein homolog SSE1

1

3

High-throughput

0.407

High

655822

HSP79
Heat shock protein homolog SSE2

1

3

High-throughput

0.407

High

655827

HSP78
Heat shock protein 78, mitochondrial

1

1

High-throughput

0.407

High

655848

HSP7E
Heat shock protein SSC3, mitochondrial

1

1

High-throughput

0.407

High

655849

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.407

High

655850

SHQ1
Protein SHQ1

1

1

Small-scale

0.407

High

655864

UBP8
Ubiquitin carboxyl-terminal hydrolase 8

1

2

High-throughput

0.407

High

655882

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

3

High-throughput

0.407

High

450403

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

2

0

High-throughput

0.307

High

520479

RM02
Large ribosomal subunit protein bL27m

2

0

High-throughput

0.307

High

524197

CAF20
Cap-associated protein CAF20

2

0

High-throughput

0.305

High

376668

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

2

0

Small-scale

0.298

High

470907

RS22A
Small ribosomal subunit protein uS8A

2

0

High-throughput

0.298

High

604936

XRN1
5'-3' exoribonuclease 1

2

0

High-throughput

0.298

High

367809

EF1A
Elongation factor 1-alpha

1

0

Small-scale

0.287

High

655829

RPB7
DNA-directed RNA polymerase II subunit RPB7

1

0

Small-scale

0.287

High

593114

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

1

0

High-throughput

0.282

High

655858

RPA43
DNA-directed RNA polymerase I subunit RPA43

1

0

High-throughput

0.282

High

655870

H1
Histone H1

1

0

High-throughput

0.282

High

633830

SGF29
SAGA-associated factor 29

1

0

High-throughput

0.279

Low

655840

IMB2
Importin subunit beta-2

1

0

High-throughput

0.279

Low

655889

GCN5
Histone acetyltransferase GCN5

1

0

High-throughput

0.279

Low

589061

PRP4
U4/U6 small nuclear ribonucleoprotein PRP4

1

0

High-throughput

0.269

Low

655914

SMT3
Ubiquitin-like protein SMT3

1

0

High-throughput

0.251

Low

339486

CDK1
Cyclin-dependent kinase 1

1

0

High-throughput

0.249

Low

357929

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.249

Low

382991

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.249

Low

405478

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.249

Low

406847

RS3
Small ribosomal subunit protein uS3

1

0

High-throughput

0.249

Low

408294

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

0

High-throughput

0.249

Low

419457

PDE2
3',5'-cyclic-nucleotide phosphodiesterase 2

1

0

High-throughput

0.249

Low

472058

RL31A
Large ribosomal subunit protein eL31A

1

0

High-throughput

0.249

Low

480529

RS8A
Small ribosomal subunit protein eS8A

1

0

High-throughput

0.249

Low

557924

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.249

Low

627759

SIS1
Protein SIS1

1

0

High-throughput

0.249

Low

655813

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

655817

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.249

Low

655823

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.249

Low

655828

RS3A1
Small ribosomal subunit protein eS1A

1

0

High-throughput

0.249

Low

655833

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.249

Low

655834

EAP1
Protein EAP1

1

0

High-throughput

0.249

Low

655842

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.249

Low

655844

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

655852

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.249

Low

655862

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.249

Low

655867

EIF2A
Eukaryotic translation initiation factor 2A

1

0

High-throughput

0.249

Low

655878

APJ1
J domain-containing protein APJ1

1

0

High-throughput

0.249

Low

655879

ORC1
Origin recognition complex subunit 1

1

0

High-throughput

0.249

Low

655884

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.249

Low

655885

RM13
Large ribosomal subunit protein mL50

1

0

High-throughput

0.249

Low

655899

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.249

Low

655903

NVJ2
Nucleus-vacuole junction protein 2

1

0

High-throughput

0.249

Low

655905

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

655909

SGO1
Shugoshin

1

0

High-throughput

0.249

Low

399357

RLA0
Large ribosomal subunit protein uL10

1

0

High-throughput

0.232

Low

406302

RL15A
Large ribosomal subunit protein eL15A

1

0

High-throughput

0.232

Low

479424

RS24A
Small ribosomal subunit protein eS24A

1

0

High-throughput

0.232

Low

534709

RL30
Large ribosomal subunit protein eL30

1

0

High-throughput

0.232

Low

543319

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.232

Low

655863

IMDH3
Inosine-5'-monophosphate dehydrogenase 3

1

0

High-throughput

0.232

Low

655872

BRE5
UBP3-associated protein BRE5

1

0

High-throughput

0.232

Low

655886

RL6A
Large ribosomal subunit protein eL6A

1

0

High-throughput

0.232

Low

655896

TAF9
Transcription initiation factor TFIID subunit 9

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024