Protein: SNU13
13 kDa ribonucleoprotein-associated protein (Small nuclear ribonucleoprotein-associated protein 1)

Gene: SNU13
Organism: Saccharomyces cerevisiae S288C
Interactions: 125
UniProt ID: P39990

Gene Ontology (top 5):
GO:0000245 - spliceosomal complex assembly
GO:0000398 - mRNA splicing, via spliceosome
GO:0000452 - snoRNA guided rRNA 2'-O-methylation
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000470 - maturation of LSU-rRNA

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

766372

NOP56
Nucleolar protein 56

8

9

Small-scale

0.969

High

766375

NOP58
Nucleolar protein 58

7

9

Small-scale

0.950

High

549406

FBRL
rRNA 2'-O-methyltransferase fibrillarin

5

2

Small-scale

0.924

High

766367

RSA1
Ribosome assembly 1 protein

7

0

Small-scale

0.918

High

748616

ENP1
Essential nuclear protein 1

2

3

High-throughput

0.754

High

766358

UTP21
U3 small nucleolar RNA-associated protein 21

2

6

Small-scale

0.754

High

744624

TAF5
Transcription initiation factor TFIID subunit 5

1

10

High-throughput

0.691

High

697212

BRR2
Pre-mRNA-splicing helicase BRR2

4

4

Small-scale

0.678

High

589077

PRP4
U4/U6 small nuclear ribonucleoprotein PRP4

1

10

High-throughput

0.665

High

766369

MAK21
Ribosome biogenesis protein MAK21

3

7

High-throughput

0.643

High

766319

HIT1
Protein HIT1

3

0

Small-scale

0.640

High

141354

RS9A
Small ribosomal subunit protein uS4A

1

4

High-throughput

0.618

High

407939

RS13
Small ribosomal subunit protein uS15

1

3

High-throughput

0.618

High

408373

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

4

High-throughput

0.618

High

742816

GBLP
Small ribosomal subunit protein RACK1

1

12

High-throughput

0.618

High

766312

UTP18
U3 small nucleolar RNA-associated protein 18

1

1

High-throughput

0.618

High

766364

UTP4
U3 small nucleolar RNA-associated protein 4

1

8

Small-scale

0.618

High

766366

RS10A
Small ribosomal subunit protein eS10A

1

2

High-throughput

0.618

High

733830

RPF2
Ribosome biogenesis protein RPF2

2

4

High-throughput

0.601

High

754084

BCD1
Box C/D snoRNA protein 1

2

0

Small-scale

0.598

High

766351

DHR1
Probable ATP-dependent RNA helicase DHR1

2

4

High-throughput

0.584

High

766363

NOC4
Nucleolar complex protein 4

2

7

Small-scale

0.584

High

754026

PIH1
Protein interacting with Hsp90 1

2

0

Small-scale

0.582

High

766325

RS12
Small ribosomal subunit protein eS12

1

2

High-throughput

0.553

High

766329

PXR1
Protein PXR1

1

1

High-throughput

0.541

High

715339

SPT7
Transcriptional activator SPT7

1

5

High-throughput

0.536

High

766320

NOP9
Nucleolar protein 9

1

1

High-throughput

0.536

High

766327

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

1

High-throughput

0.536

High

766340

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

6

High-throughput

0.536

High

766346

GCN5
Histone acetyltransferase GCN5

1

4

High-throughput

0.536

High

593533

DBP3
ATP-dependent RNA helicase DBP3

1

4

High-throughput

0.515

High

747107

RFC5
Replication factor C subunit 5

1

1

High-throughput

0.515

High

766326

UBP15
Ubiquitin carboxyl-terminal hydrolase 15

1

5

High-throughput

0.515

High

633864

SGF29
SAGA-associated factor 29

1

0

High-throughput

0.513

High

766314

VHR1
Transcription factor VHR1

1

0

High-throughput

0.493

High

766323

BPL1
Biotin--protein ligase

1

0

High-throughput

0.493

High

766334

CUZ1
CDC48-associated ubiquitin-like/zinc finger protein 1

1

0

High-throughput

0.493

High

766350

POLH
DNA polymerase eta

1

0

High-throughput

0.493

High

766352

BUD22
Bud site selection protein 22

1

0

High-throughput

0.493

High

766331

BRE5
UBP3-associated protein BRE5

1

4

High-throughput

0.489

High

339658

CDK1
Cyclin-dependent kinase 1

1

3

High-throughput

0.479

High

375404

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

2

High-throughput

0.479

High

383169

RL25
Large ribosomal subunit protein uL23

1

4

High-throughput

0.479

High

405644

RL26A
Large ribosomal subunit protein uL24A

1

7

High-throughput

0.479

High

407078

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.479

High

413526

RS14A
Small ribosomal subunit protein uS11A

1

3

High-throughput

0.479

High

425972

RS19A
Small ribosomal subunit protein eS19A

1

2

High-throughput

0.479

High

472212

RL31A
Large ribosomal subunit protein eL31A

1

5

High-throughput

0.479

High

480124

RS6A
Small ribosomal subunit protein eS6A

1

3

High-throughput

0.479

High

480690

RS8A
Small ribosomal subunit protein eS8A

1

3

High-throughput

0.479

High

535003

RL3
Large ribosomal subunit protein uL3

1

3

High-throughput

0.479

High

558071

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

3

High-throughput

0.479

High

604562

RPA2
DNA-directed RNA polymerase I subunit RPA135

1

1

High-throughput

0.479

High

605050

XRN1
5'-3' exoribonuclease 1

1

2

High-throughput

0.479

High

606021

RAD53
Serine/threonine-protein kinase RAD53

1

1

High-throughput

0.479

High

628094

SIS1
Protein SIS1

1

2

High-throughput

0.479

High

631902

RS2
Small ribosomal subunit protein uS5

1

3

High-throughput

0.479

High

634617

KRR1
KRR1 small subunit processome component

1

4

High-throughput

0.479

High

645468

RS7A
Small ribosomal subunit protein eS7A

1

2

High-throughput

0.479

High

662315

TF2B
Transcription initiation factor IIB

1

5

High-throughput

0.479

High

663870

TF3B
Transcription factor IIIB 70 kDa subunit

1

5

High-throughput

0.479

High

706294

RS3A1
Small ribosomal subunit protein eS1A

1

3

High-throughput

0.479

High

729933

RS27A
Small ribosomal subunit protein eS27A

1

2

High-throughput

0.479

High

752478

RS20
Small ribosomal subunit protein uS10

1

2

High-throughput

0.479

High

754862

SSF1
Ribosome biogenesis protein SSF1

1

4

High-throughput

0.479

High

766310

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

3

High-throughput

0.479

High

766313

MLP2
Protein MLP2

1

4

High-throughput

0.479

High

766315

DSN1
Kinetochore-associated protein DSN1

1

3

High-throughput

0.479

High

766316

RLP7
Ribosome biogenesis protein RLP7

1

8

High-throughput

0.479

High

766317

UTP10
U3 small nucleolar RNA-associated protein 10

1

3

High-throughput

0.479

High

766322

MOG1
Nuclear import protein MOG1

1

2

High-throughput

0.479

High

766324

TRF5
Poly(A) RNA polymerase protein 1

1

4

Small-scale

0.479

High

766330

PAP2
Poly(A) RNA polymerase protein 2

1

4

Small-scale

0.479

High

766335

NOP15
Ribosome biogenesis protein 15

1

5

High-throughput

0.479

High

766336

APJ1
J domain-containing protein APJ1

1

4

High-throughput

0.479

High

766341

RS15
Small ribosomal subunit protein uS19

1

3

High-throughput

0.479

High

766345

TOM1
E3 ubiquitin-protein ligase TOM1

1

12

High-throughput

0.479

High

766347

HAS1
ATP-dependent RNA helicase HAS1

1

15

High-throughput

0.479

High

766349

RUVB1
RuvB-like protein 1

1

3

High-throughput

0.479

High

766353

UTP14
U3 small nucleolar RNA-associated protein 14

1

4

High-throughput

0.479

High

766355

RRP5
rRNA biogenesis protein RRP5

1

2

High-throughput

0.479

High

766359

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.479

High

766361

TFC6
Transcription factor tau 91 kDa subunit

1

1

High-throughput

0.479

High

766365

SGO1
Shugoshin

1

3

High-throughput

0.479

High

766368

YRA1
RNA annealing protein YRA1

1

4

Small-scale

0.479

High

766371

SNU66
66 kDa U4/U6.U5 small nuclear ribonucleoprotein component

1

2

Small-scale

0.479

High

766373

AIR2
Protein AIR2

1

7

Small-scale

0.479

High

766376

H2AZ
Histone H2A.Z

1

3

High-throughput

0.479

High

766377

EFG1P
rRNA-processing protein EFG1

1

2

Small-scale

0.479

High

434758

PBS2
MAP kinase kinase PBS2

1

3

High-throughput

0.470

High

716183

SKI2
Antiviral helicase SKI2

1

9

High-throughput

0.470

High

756301

AP18A
Clathrin coat assembly protein AP180A

1

1

High-throughput

0.470

High

766357

EIS1
Eisosome protein 1

1

1

High-throughput

0.470

High

766333

CSL4
Exosome complex component CSL4

1

0

High-throughput

0.458

High

766348

MTQ2
eRF1 methyltransferase catalytic subunit MTQ2

1

0

High-throughput

0.458

High

692301

PRP19
Pre-mRNA-processing factor 19

1

8

Small-scale

0.445

High

766321

MPP10
U3 small nucleolar RNA-associated protein MPP10

1

2

Small-scale

0.445

High

766339

SEN1
Helicase SEN1

1

3

Small-scale

0.445

High

766343

ADA2
Transcriptional adapter 2

1

1

High-throughput

0.445

High

766344

NU116
Nucleoporin NUP116/NSP116

1

1

Small-scale

0.445

High

358085

RS17A
Small ribosomal subunit protein eS17A

1

3

High-throughput

0.437

High

471077

RS22A
Small ribosomal subunit protein uS8A

1

2

High-throughput

0.437

High

482280

RS18A
Small ribosomal subunit protein uS13A

1

2

High-throughput

0.437

High

524320

CAF20
Cap-associated protein CAF20

1

2

High-throughput

0.437

High

700434

RSSA1
Small ribosomal subunit protein uS2A

1

2

High-throughput

0.437

High

762225

LAA1
AP-1 accessory protein LAA1

1

3

High-throughput

0.437

High

766328

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

2

High-throughput

0.437

High

766332

GIS2
Zinc finger protein GIS2

1

7

High-throughput

0.437

High

766337

SAM50
Sorting assembly machinery 50 kDa subunit

1

3

High-throughput

0.437

High

766338

NUM1
Nuclear migration protein NUM1

1

6

High-throughput

0.437

High

766360

PEX30
Peroxisomal membrane protein PEX30

1

1

Small-scale

0.437

High

757422

SPT8
Transcription factor SPT8

1

0

High-throughput

0.426

High

766311

PSF2
DNA replication complex GINS protein PSF2

1

0

High-throughput

0.426

High

766356

TAF9
Transcription initiation factor TFIID subunit 9

1

0

High-throughput

0.426

High

766362

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.426

High

766342

UBC7
Ubiquitin-conjugating enzyme E2 7

1

2

High-throughput

0.417

High

761521

YCFI
Metal resistance protein YCF1

1

0

High-throughput

0.282

High

766354

SEN15
tRNA-splicing endonuclease subunit SEN15

1

0

High-throughput

0.279

Low

427370

ARD1
N-terminal acetyltransferase A complex catalytic subunit ARD1

1

0

High-throughput

0.269

Low

634025

BUD3
Bud site selection protein 3

1

0

High-throughput

0.269

Low

766318

SPC1
Signal peptidase complex subunit 1

1

0

High-throughput

0.269

Low

649273

CBPS
Carboxypeptidase S

1

0

High-throughput

0.249

Low

753345

GOSR1
Golgi SNAP receptor complex member 1

1

0

High-throughput

0.249

Low

766370

RGT2
High glucose sensor RGT2

1

0

High-throughput

0.238

Low

766374

PRM4
Pheromone-regulated membrane protein 4

1

0

Small-scale

0.238

Low


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Last updated: 15 Jul 2024