HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
965466	NOP3 Serine/arginine	8	18	Small-scale	0.970	High
965478	SKY1 Serine/threonine-protein kinase SKY1	7	20	Small-scale	0.963	High
710199	NCBP1 Nuclear cap-binding protein complex subunit 1	7	11	Small-scale	0.951	High
965508	NCBP2 Nuclear cap-binding protein subunit 2	5	20	Small-scale	0.922	High
633981	GBP2 Serine/arginine	5	20	Small-scale	0.909	High
965521	MTR10 mRNA transport regulator MTR10	4	18	Small-scale	0.893	High
960462	NAM8 Protein NAM8	4	19	Small-scale	0.892	High
962579	RU17 U1 small nuclear ribonucleoprotein 70 kDa homolog	4	20	Small-scale	0.878	High
696660	RU1A U1 small nuclear ribonucleoprotein A	4	1	Small-scale	0.878	High
694191	PUB1 Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1	4	20	Small-scale	0.875	High
965513	YRA1 RNA annealing protein YRA1	4	20	Small-scale	0.874	High
965484	CTK1 CTD kinase subunit alpha	3	20	Small-scale	0.861	High
407253	RS3 Small ribosomal subunit protein uS3	3	5	High-throughput	0.827	High
743641	HMT1 Protein arginine N-methyltransferase 1	13	7	Small-scale	0.764	High
376899	PABP Polyadenylate-binding protein, cytoplasmic and nuclear	2	19	Small-scale	0.754	High
965515	BBP Branchpoint-bridging protein	2	15	Small-scale	0.754	High
965523	HRP1 Nuclear polyadenylated RNA-binding protein 4	2	20	Small-scale	0.754	High
965480	SNU56 56 kDa U1 small nuclear ribonucleoprotein component	2	0	Small-scale	0.728	High
440083	RPB2 DNA-directed RNA polymerase II subunit RPB2	2	0	Small-scale	0.716	High
965522	MEX67 mRNA export factor MEX67	5	8	Small-scale	0.714	High
383302	RL25 Large ribosomal subunit protein uL23	2	6	Small-scale	0.694	High
693146	CDC5 Cell cycle serine/threonine-protein kinase CDC5/MSD2	1	2	Small-scale	0.691	High
775547	SGN1 RNA-binding protein SGN1	1	20	High-throughput	0.691	High
965506	HRK1 Serine/threonine-protein kinase HRK1	1	7	High-throughput	0.691	High
375480	RPB1 DNA-directed RNA polymerase II subunit RPB1	4	4	Small-scale	0.680	High
965471	XRN2 5'-3' exoribonuclease 2	4	12	Small-scale	0.676	High
774814	AIR1 Protein AIR1	3	14	Small-scale	0.672	High
648417	NSR1 Nuclear localization sequence-binding protein	1	18	Small-scale	0.656	High
512380	SSB1 Ribosome-associated molecular chaperone SSB1	3	9	Small-scale	0.656	High
965517	AIR2 Protein AIR2	5	14	Small-scale	0.651	High
550103	CSK21 Casein kinase II subunit alpha	1	20	Small-scale	0.647	High
565743	PHO85 Cyclin-dependent protein kinase PHO85	1	12	Small-scale	0.647	High
765038	IF4F1 Eukaryotic initiation factor 4F subunit p150	3	15	Small-scale	0.646	High
628373	SIS1 Protein SIS1	3	2	High-throughput	0.643	High
416057	DED1 ATP-dependent RNA helicase DED1	3	9	Small-scale	0.642	High
366749	HSP82 ATP-dependent molecular chaperone HSP82	3	5	High-throughput	0.640	High
524419	CAF20 Cap-associated protein CAF20	3	2	Small-scale	0.640	High
558208	RPB3 DNA-directed RNA polymerase II subunit RPB3	3	2	Small-scale	0.640	High
605126	XRN1 5'-3' exoribonuclease 1	3	12	Small-scale	0.640	High
632035	RS2 Small ribosomal subunit protein uS5	3	8	Small-scale	0.640	High
732383	MUD2 Splicing factor MUD2	3	1	Small-scale	0.640	High
492152	HSP71 Heat shock protein SSA1	3	7	High-throughput	0.633	High
765363	RSP5 E3 ubiquitin-protein ligase RSP5	2	18	Small-scale	0.619	High
485576	SSBP1 Single-stranded nucleic acid-binding protein	1	19	Small-scale	0.618	High
606214	TRX1 Thioredoxin-1	1	2	High-throughput	0.618	High
611747	TRX2 Thioredoxin-2	1	1	High-throughput	0.618	High
615173	BUR1 Serine/threonine-protein kinase BUR1	1	15	Small-scale	0.618	High
634180	SRO9 RNA-binding protein SRO9	1	20	Small-scale	0.618	High
757864	HRB1 Serine/arginine	1	19	Small-scale	0.618	High
758922	NAB3 Nuclear polyadenylated RNA-binding protein 3	1	1	Small-scale	0.618	High
863164	NRD1 Protein NRD1	1	3	Small-scale	0.618	High
965469	CUS1 Cold sensitive U2 snRNA suppressor 1	1	4	High-throughput	0.618	High
965481	ARX1 Probable metalloprotease ARX1	2	3	Small-scale	0.601	High
624156	DBP2 ATP-dependent RNA helicase DBP2	2	7	Small-scale	0.600	High
965498	SUB2 ATP-dependent RNA helicase SUB2	2	20	Small-scale	0.600	High
965489	RU1C U1 small nuclear ribonucleoprotein C	2	1	Small-scale	0.595	High
482406	RS18A Small ribosomal subunit protein uS13A	2	2	High-throughput	0.584	High
645598	RS7A Small ribosomal subunit protein eS7A	2	4	High-throughput	0.584	High
700574	RSSA1 Small ribosomal subunit protein uS2A	2	7	High-throughput	0.584	High
742943	GBLP Small ribosomal subunit protein RACK1	2	20	High-throughput	0.584	High
752612	RS20 Small ribosomal subunit protein uS10	2	4	High-throughput	0.584	High
820117	RS12 Small ribosomal subunit protein eS12	2	2	High-throughput	0.584	High
858813	DXO Decapping nuclease RAI1	2	1	Small-scale	0.584	High
965467	RS15 Small ribosomal subunit protein uS19	2	7	High-throughput	0.584	High
965499	LUC7 Protein LUC7	2	9	Small-scale	0.584	High
544259	HSC82 ATP-dependent molecular chaperone HSC82	2	5	High-throughput	0.571	High
965497	BRE1 E3 ubiquitin-protein ligase BRE1	2	16	Small-scale	0.571	High
965495	URN1 Pre-mRNA-splicing factor URN1	2	0	High-throughput	0.569	High
701043	SMY2 Protein SMY2	2	0	Small-scale	0.559	High
860151	SNU71 U1 small nuclear ribonucleoprotein component SNU71	2	0	Small-scale	0.559	High
965512	RRP6 Exosome complex exonuclease RRP6	1	2	Small-scale	0.552	High
769207	SSB2 Ribosome-associated molecular chaperone SSB2	2	9	High-throughput	0.552	High
695320	HSP7F Heat shock protein homolog SSE1	1	9	High-throughput	0.536	High
860347	EIF2A Eukaryotic translation initiation factor 2A	1	7	High-throughput	0.536	High
965476	GCN5 Histone acetyltransferase GCN5	1	20	High-throughput	0.536	High
965493	MAG2 E3 ubiquitin-protein ligase MAG2	1	1	High-throughput	0.536	High
358211	RS17A Small ribosomal subunit protein eS17A	2	4	High-throughput	0.533	High
426101	RS19A Small ribosomal subunit protein eS19A	2	7	High-throughput	0.533	High
471203	RS22A Small ribosomal subunit protein uS8A	2	2	High-throughput	0.533	High
480261	RS6A Small ribosomal subunit protein eS6A	2	8	High-throughput	0.533	High
480826	RS8A Small ribosomal subunit protein eS8A	2	4	High-throughput	0.533	High
706435	RS3A1 Small ribosomal subunit protein eS1A	2	5	High-throughput	0.533	High
479371	RS23B Small ribosomal subunit protein uS12B	1	0	High-throughput	0.517	High
756855	RIX1 Pre-rRNA-processing protein RIX1	1	1	Small-scale	0.515	High
763515	NUP60 Nucleoporin NUP60	1	1	Small-scale	0.515	High
965468	MLP1 Protein MLP1	1	19	Small-scale	0.515	High
965509	KEL3 Kelch repeat-containing protein 3	1	5	High-throughput	0.515	High
965518	NOP58 Nucleolar protein 58	1	4	High-throughput	0.515	High
692055	NAB2 Nuclear polyadenylated RNA-binding protein NAB2	1	7	Small-scale	0.508	High
659827	SBA1 Co-chaperone protein SBA1	1	0	Small-scale	0.504	High
703258	PRP40 Pre-mRNA-processing protein PRP40	1	7	High-throughput	0.501	High
765152	IF4F2 Eukaryotic initiation factor 4F subunit p130	1	20	Small-scale	0.501	High
965479	ENT5 Epsin-5	1	1	Small-scale	0.501	High
756378	NMD3 60S ribosomal export protein NMD3	1	0	Small-scale	0.493	High
965500	NOP6 Nucleolar protein 6	1	2	High-throughput	0.489	High
624643	PCL1 PHO85 cyclin-1	1	0	Small-scale	0.480	High
797304	WWM1 WW domain-containing protein WWM1	1	0	High-throughput	0.480	High
141474	RS9A Small ribosomal subunit protein uS4A	1	8	High-throughput	0.479	High
355594	H2B1 Histone H2B.1	1	6	Small-scale	0.479	High
355978	H2B2 Histone H2B.2	1	6	Small-scale	0.479	High
356663	H4 Histone H4	1	10	Small-scale	0.479	High
408066	RS13 Small ribosomal subunit protein uS15	1	7	High-throughput	0.479	High
410442	SC160 Protein SCP160	1	20	High-throughput	0.479	High
413661	RS14A Small ribosomal subunit protein uS11A	1	5	High-throughput	0.479	High
479627	RS30A Small ribosomal subunit protein eS30A	1	2	High-throughput	0.479	High
479804	RS4A Small ribosomal subunit protein eS4A	1	4	High-throughput	0.479	High
482921	RL35A Large ribosomal subunit protein uL29A	1	3	High-throughput	0.479	High
542144	CYC8 General transcriptional corepressor CYC8	1	12	Small-scale	0.479	High
616116	PRP28 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28	1	18	Small-scale	0.479	High
619163	SPT6 Transcription elongation factor SPT6	1	1	Small-scale	0.479	High
630091	SNT1 Probable DNA-binding protein SNT1	1	3	Small-scale	0.479	High
634436	SPB1 27S pre-rRNA	1	11	High-throughput	0.479	High
635711	TAH1 TPR repeat-containing protein associated with Hsp90	1	6	Small-scale	0.479	High
644940	RS5 Small ribosomal subunit protein uS7	1	7	High-throughput	0.479	High
645105	RL16A Large ribosomal subunit protein uL13A	1	5	High-throughput	0.479	High
650368	SPT5 Transcription elongation factor SPT5	1	2	Small-scale	0.479	High
663059	TF2B Transcription initiation factor IIB	1	3	High-throughput	0.479	High
665002	BMH1 Protein BMH1	1	6	High-throughput	0.479	High
688379	RPC3 DNA-directed RNA polymerase III subunit RPC3	1	1	High-throughput	0.479	High
692340	PRP19 Pre-mRNA-processing factor 19	1	14	Small-scale	0.479	High
696388	PP12 Serine/threonine-protein phosphatase PP1-2	1	13	Small-scale	0.479	High
697423	CHD1 Chromo domain-containing protein 1	1	19	Small-scale	0.479	High
703099	MRT4 Ribosome assembly factor MRT4	1	5	Small-scale	0.479	High
730069	RS27A Small ribosomal subunit protein eS27A	1	3	High-throughput	0.479	High
730889	CENPA Histone H3-like centromeric protein CSE4	1	3	High-throughput	0.479	High
731607	EAP1 Protein EAP1	1	2	High-throughput	0.479	High
732683	SWD2 COMPASS component SWD2	1	19	Small-scale	0.479	High
746765	FL2D Protein MUM2	1	1	Small-scale	0.479	High
756559	KOG1 Target of rapamycin complex 1 subunit KOG1	1	8	Small-scale	0.479	High
756706	NACA Nascent polypeptide-associated complex subunit alpha	1	1	High-throughput	0.479	High
767818	LSM4 U6 snRNA-associated Sm-like protein LSm4	1	3	Small-scale	0.479	High
768034	NSA2 Ribosome biogenesis protein NSA2	1	7	High-throughput	0.479	High
770056	RIO2 Serine/threonine-protein kinase RIO2	1	9	High-throughput	0.479	High
775823	DSN1 Kinetochore-associated protein DSN1	1	2	High-throughput	0.479	High
778627	PRP17 Pre-mRNA-processing factor 17	1	18	Small-scale	0.479	High
784201	RL10 Large ribosomal subunit protein uL16	1	1	Small-scale	0.479	High
797534	RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11	1	14	High-throughput	0.479	High
809742	CTK2 CTD kinase subunit beta	1	14	Small-scale	0.479	High
809753	CTK3 CTD kinase subunit gamma	1	1	Small-scale	0.479	High
810531	LSM1 Sm-like protein LSm1	1	9	Small-scale	0.479	High
810585	ALB1 Ribosome biogenesis protein ALB1	1	1	High-throughput	0.479	High
810898	MTR4 ATP-dependent RNA helicase DOB1	1	20	Small-scale	0.479	High
812078	MOG1 Nuclear import protein MOG1	1	1	High-throughput	0.479	High
816532	RS7B Small ribosomal subunit protein eS7B	1	4	High-throughput	0.479	High
819874	TRF5 Poly(A) RNA polymerase protein 1	1	11	Small-scale	0.479	High
859409	PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	1	11	Small-scale	0.479	High
859618	LSG1 Large subunit GTPase 1	1	9	High-throughput	0.479	High
862763	THO2 THO complex subunit 2	1	16	Small-scale	0.479	High
863691	PAP2 Poly(A) RNA polymerase protein 2	1	11	Small-scale	0.479	High
864665	NOG2 Nucleolar GTP-binding protein 2	1	9	High-throughput	0.479	High
865289	GIS2 Zinc finger protein GIS2	1	15	High-throughput	0.479	High
865605	UBP10 Ubiquitin carboxyl-terminal hydrolase 10	1	10	High-throughput	0.479	High
953678	CTR9 RNA polymerase-associated protein CTR9	1	8	Small-scale	0.479	High
965474	HOT1 High-osmolarity-induced transcription protein 1	1	1	Small-scale	0.479	High
965475	TOM1 E3 ubiquitin-protein ligase TOM1	1	18	High-throughput	0.479	High
965483	RUVB1 RuvB-like protein 1	1	5	High-throughput	0.479	High
965486	PUF6 Pumilio homology domain family member 6	1	12	Small-scale	0.479	High
965487	RRP5 rRNA biogenesis protein RRP5	1	13	High-throughput	0.479	High
965491	MMS22 E3 ubiquitin-protein ligase substrate receptor MMS22	1	2	High-throughput	0.479	High
965492	TFC6 Transcription factor tau 91 kDa subunit	1	2	High-throughput	0.479	High
965496	TSR1 Ribosome biogenesis protein TSR1	1	5	High-throughput	0.479	High
965502	BUD20 Bud site selection protein 20	1	1	High-throughput	0.479	High
965504	SGO1 Shugoshin	1	1	High-throughput	0.479	High
965510	TMA46 Translation machinery-associated protein 46	1	1	High-throughput	0.479	High
965514	MAK21 Ribosome biogenesis protein MAK21	1	11	High-throughput	0.479	High
965516	RUVB2 RuvB-like protein 2	1	5	High-throughput	0.479	High
655883	GAR1 H/ACA ribonucleoprotein complex subunit GAR1	1	4	Small-scale	0.464	High
696886	RML2 Large ribosomal subunit protein uL2m	1	5	Small-scale	0.464	High
593084	RPB4 DNA-directed RNA polymerase II subunit RPB4	1	0	Small-scale	0.458	High
593179	RPAB1 DNA-directed RNA polymerases I, II, and III subunit RPABC1	1	0	Small-scale	0.458	High
748173	AIM4 Altered inheritance of mitochondria protein 4	1	0	High-throughput	0.458	High
755976	YHS7 Uncharacterized protein YHR127W	1	0	High-throughput	0.458	High
756026	NSG1 Protein NSG1	1	0	High-throughput	0.458	High
759428	STM1 Suppressor protein STM1	1	0	High-throughput	0.458	High
765204	RS26A Small ribosomal subunit protein eS26A	1	0	High-throughput	0.458	High
766416	PXP1 2-hydroxyacyl-CoA lyase	1	0	High-throughput	0.458	High
774134	TM108 Protein TMA108	1	0	High-throughput	0.458	High
805116	SAC3 Nuclear mRNA export protein SAC3	1	0	High-throughput	0.458	High
865558	SQS1 Protein SQS1	1	0	High-throughput	0.458	High
965472	LGE1 Transcriptional regulatory protein LGE1	1	0	High-throughput	0.458	High
965473	IMA1 Importin subunit alpha	1	0	Small-scale	0.458	High
965477	CWC21 Pre-mRNA-splicing factor CWC21	1	0	Small-scale	0.458	High
965482	MTQ2 eRF1 methyltransferase catalytic subunit MTQ2	1	0	High-throughput	0.458	High
965485	RRP17 Ribosomal RNA-processing protein 17	1	0	High-throughput	0.458	High
965488	RBS1 RNA-binding suppressor of PAS kinase protein 1	1	0	Small-scale	0.458	High
965490	BUR2 Protein BUR2	1	0	Small-scale	0.458	High
965494	IWS1 Transcription factor SPN1	1	0	Small-scale	0.458	High
965501	UBR2 E3 ubiquitin-protein ligase UBR2	1	0	High-throughput	0.458	High
965505	MCA1 Metacaspase-1	1	0	High-throughput	0.458	High
965511	YL11B Transposon Ty1-LR1 Gag-Pol polyprotein	1	0	High-throughput	0.458	High
812531	ENT3 Epsin-3	1	1	Small-scale	0.457	High
965470	NU116 Nucleoporin NUP116/NSP116	1	6	Small-scale	0.457	High
680935	HS104 Heat shock protein 104	1	2	High-throughput	0.445	High
705542	HSP78 Heat shock protein 78, mitochondrial	1	1	High-throughput	0.445	High
715372	SPT7 Transcriptional activator SPT7	1	13	High-throughput	0.445	High
761286	CAJ1 Protein CAJ1	1	1	High-throughput	0.445	High
959989	SEN1 Helicase SEN1	1	20	Small-scale	0.445	High
141755	THP2 THO complex subunit THP2	1	2	High-throughput	0.437	High
405780	RL26A Large ribosomal subunit protein uL24A	1	12	High-throughput	0.437	High
406049	RL33A Large ribosomal subunit protein eL33A	1	1	High-throughput	0.437	High
406596	RL22A Large ribosomal subunit protein eL22A	1	1	High-throughput	0.437	High
407574	RS9B Small ribosomal subunit protein uS4B	1	8	High-throughput	0.437	High
420324	CALM Calmodulin	1	1	High-throughput	0.437	High
426324	RS19B Small ribosomal subunit protein eS19B	1	7	High-throughput	0.437	High
472349	RL31A Large ribosomal subunit protein eL31A	1	5	High-throughput	0.437	High
479519	RS24A Small ribosomal subunit protein eS24A	1	3	High-throughput	0.437	High
481549	RS11B Small ribosomal subunit protein uS17B	1	1	High-throughput	0.437	High
481815	RS16B Small ribosomal subunit protein uS9B	1	12	High-throughput	0.437	High
630884	NLE1 Ribosome assembly protein 4	1	20	High-throughput	0.437	High
634734	KRR1 KRR1 small subunit processome component	1	8	High-throughput	0.437	High
762473	LAA1 AP-1 accessory protein LAA1	1	2	High-throughput	0.437	High
773973	MLP2 Protein MLP2	1	18	High-throughput	0.437	High
866781	SAM50 Sorting assembly machinery 50 kDa subunit	1	1	High-throughput	0.437	High
881720	RL22B Large ribosomal subunit protein eL22B	1	1	High-throughput	0.437	High
959839	NUM1 Nuclear migration protein NUM1	1	16	High-throughput	0.437	High
965507	RS10A Small ribosomal subunit protein eS10A	1	6	High-throughput	0.437	High
757453	SPT8 Transcription factor SPT8	1	0	High-throughput	0.426	High
762154	YM11 Uncharacterized protein YMR124W	1	0	High-throughput	0.426	High
541776	SEC63 Protein translocation protein SEC63	1	6	High-throughput	0.407	High
760934	TCPD T-complex protein 1 subunit delta	1	1	High-throughput	0.407	High
772582	JEM1 DnaJ-like chaperone JEM1	1	1	High-throughput	0.407	High
772918	TCPE T-complex protein 1 subunit epsilon	1	1	High-throughput	0.407	High
798018	ERJ5 ER-localized J domain-containing protein 5	1	1	High-throughput	0.407	High
687109	VPS10 Vacuolar protein sorting/targeting protein VPS10	2	0	High-throughput	0.324	High
965503	AUS1 ATP-dependent permease AUS1	1	0	High-throughput	0.261	Low
471523	RS28B Small ribosomal subunit protein eS28B	1	0	High-throughput	0.249	Low
618513	HXT2 High-affinity glucose transporter HXT2	1	0	High-throughput	0.249	Low
692878	SPT16 FACT complex subunit SPT16	1	0	Small-scale	0.249	Low
780519	RS29A Small ribosomal subunit protein uS14A	1	0	High-throughput	0.249	Low
965519	RS21B Small ribosomal subunit protein eS21B	1	0	High-throughput	0.249	Low
965520	RS25A Small ribosomal subunit protein eS25A	1	0	High-throughput	0.249	Low
761055	TCPZ T-complex protein 1 subunit zeta	1	0	High-throughput	0.232	Low