HitPredict - High confidence protein-protein interactions

Protein: CLO
110 kDa U5 small nuclear ribonucleoprotein component CLO (Protein CLOTHO) (Protein GAMETOPHYTE FACTOR 1) (Protein MATERNAL EFFECT EMBRYO ARREST 5) (Protein VAJRA-1) (SNU114 homolog)

Gene: CLO
Organism: Arabidopsis thaliana
Interactions: 7
UniProt ID: Q9LNC5

Gene Ontology (top 5):
GO:0000398 - mRNA splicing, via spliceosome
GO:0003924 - GTPase activity
GO:0005525 - GTP binding
GO:0005576 - extracellular region
GO:0009505 - plant-type cell wall

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
1338726	PRP8A Pre-mRNA-processing-splicing factor 8A	1	5	Small-scale	0.590	High
1338725	SR45 Serine/arginine-rich splicing factor SR45	2	8	Small-scale	0.584	High
249917	O65655 SAP domain-containing protein	1	1	Small-scale	0.506	High
1092144	UBQ3 Polyubiquitin 3 [Cleaved into: Ubiquitin]	1	10	High-throughput	0.437	High
1099296	NUP43 Nuclear pore complex protein NUP43	1	7	High-throughput	0.437	High
1338727	DEXHC DExH-box ATP-dependent RNA helicase DExH12	1	10	Small-scale	0.417	High
1277173	SPF27 Pre-mRNA-splicing factor SPF27 homolog	1	2	Small-scale	0.407	High

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024