HitPredict

Interactor 1: RBM39 (Q14498)
RNA-binding protein 39 (CAPER alpha) (CAPERalpha) (Hepatocellular carcinoma protein 1) (RNA-binding motif protein 39) (RNA-binding region-containing protein 2) (Splicing factor HCC1)
Gene: RBM39

Interactor 2: KHDR2 (Q5VWX1)
KH domain-containing, RNA-binding, signal transduction-associated protein 2 (Sam68-like mammalian protein 1) (SLM-1) (hSLM-1)
Gene: KHDRBS2

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	17643375
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0005654 - nucleoplasm GO:0006397 - mRNA processing
Homologous interactions	16

Homologous interactions

Color coding for hit scores

	1 530 Hs			1 349
+	Mm
		1141330 RBM39_MOUSE (1-530): 5.89e-101: 316: 99.81		KHDR1_MOUSE (3-349): 9.08e-129: 377: 62.32
+	Hs
		991764 RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00		KHDR1_HUMAN (3-349): 4.21e-120: 355: 62.50
+	Hs
		1073584 SF3B4_HUMAN (238-395): 5.66e-23: 103: 22.79		KHDR2_HUMAN (1-349): 6.2e-151: 430: 100.00
+	Hs
		1054339 RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00		SF01_HUMAN (8-209): 6.71e-57: 196: 27.01
+	Hs
		162069 HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93		KHDR2_HUMAN (1-349): 6.2e-151: 430: 100.00
+	Hs
		1139252 MSI2H_HUMAN (149-309): 3.89e-15: 78.6: 28.57		KHDR2_HUMAN (1-349): 6.2e-151: 430: 100.00
+	Hs
		162020 HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93		KHDR1_HUMAN (3-349): 4.21e-120: 355: 62.50
+	Hs
		1075767 PUF60_HUMAN (141-513): 7.12e-66: 225: 19.41		SF01_HUMAN (8-209): 6.71e-57: 196: 27.01
+	Sc
		376973 PABP_YEAST (40-441): 6.66e-53: 190: 12.17		BBP_YEAST (8-262): 8.89e-49: 172: 22.07
+	Hs
		1020313 ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89		QKI_HUMAN (5-272): 2.33e-89: 273: 33.80
+	Hs
		1288210 MSI2H_HUMAN (149-309): 3.89e-15: 78.6: 28.57		QKI_HUMAN (5-272): 2.33e-89: 273: 33.80
+	Hs
		1198917 RBM23_HUMAN (422-503): 5.12e-10: 63.8: 15.12		QKI_HUMAN (5-272): 2.33e-89: 273: 33.80
+	Hs
		1073577 SF3B4_HUMAN (238-395): 5.66e-23: 103: 22.79		SF01_HUMAN (8-209): 6.71e-57: 196: 27.01
+	Hs
		1075720 DAZP1_HUMAN (243-329): 7.18e-19: 90.6: 29.89		SF01_HUMAN (8-209): 6.71e-57: 196: 27.01
+	Hs
		162058 HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93		SF01_HUMAN (8-209): 6.71e-57: 196: 27.01
+	Hs
		1075719 MSI2H_HUMAN (149-309): 3.89e-15: 78.6: 28.57		SF01_HUMAN (8-209): 6.71e-57: 196: 27.01