Interactor 1: NRPE1 (Q5D869)
DNA-directed RNA polymerase V subunit 1 (DNA-directed RNA polymerase D subunit 1b) (AtNRPD1b) (Nuclear RNA polymerase D 1b) (DNA-directed RNA polymerase E subunit 1) (Nuclear RNA polymerase E 1) (EC 2.7.7.6) (Protein DEFECTIVE IN MERISTEM SILENCING 5) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3) (Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1) (RNA polymerase IV subunit 1) (POL IV 1)
Gene: NRPE1
Interactor 2: RPD6A (Q9FJ98)
DNA-directed RNA polymerases II, IV and V subunit 6A (RNA polymerase Rpb6)
Gene: NRPB6A
Species: Arabidopsis thaliana
Source: biogrid
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.38 | 1.00 | 0.618 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 25561521 |
| Identification Methods | affinity chromatography technology |
| Interaction Type | physical association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | RNA_pol_Rpb1_2~RNA_pol_Rpb6, RNA_pol_Rpb1_3~RNA_pol_Rpb6, RNA_pol_Rpb1_5~RNA_pol_Rpb6 |
| Common GO terms | GO:0000418 - RNA polymerase IV complex GO:0000419 - RNA polymerase V complex GO:0001055 - RNA polymerase II activity GO:0003677 - DNA binding GO:0005665 - RNA polymerase II, core complex |
| Homologous interactions | 10 |
Homologous interactions
Color coding for hit scores 
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
