HitPredict

Interactor 1: SRC30 (Q8L3X8)
Serine/arginine-rich SC35-like splicing factor SCL30 (At-SCL30) (AtSCL30) (SC35-like splicing factor 30) (Serine/arginine-rich splicing factor 30)
Gene: SCL30

Interactor 2: RSZ33 (Q8VYA5)
Serine/arginine-rich splicing factor RS2Z33 (RS-containing zinc finger protein 33) (At-RS2Z33) (At-RSZ33) (AtRSZ33)
Gene: RS2Z33

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.65 1.00 0.812

The method score is based on:

Property Details
Experiments 12176998, 21798944
Identification Methods pull down, two hybrid, two hybrid array
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains RRM_1~RRM_1
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0003729 - mRNA binding
GO:0005681 - spliceosomal complex
GO:0008380 - RNA splicing
GO:0016607 - nuclear speck
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 262
At

1 290
+ At
+ At
+ At
+ At
+ At
+ At
+ At
+ Zm
+ At
+ At
+ At
+ Hs
+ Hs
+ Hs
+ Hs
+ At
+ Hs
+ Hs
+ Hs
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024