HitPredict

Interactor 1: Q8U0M3 (Q8U0M3)
DNA-directed RNA polymerase subunit beta (EC 2.7.7.6)
Gene: PF1564

Interactor 2: Q8U0M4 (Q8U0M4)
DNA-directed RNA polymerase subunit Rpo1N (EC 2.7.7.6) (DNA-directed RNA polymerase subunit A')
Gene: rpo1N

Species: Pyrococcus furiosus DSM 3638

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.33 1.00 0.575

The method score is based on:

Property Details
Experiments 21386817
Identification Methods molecular sieving
Interaction Type association

The annotation score is based on:

Property Details
Interacting Pfam domains RNA_pol_Rpb1_1~RNA_pol_Rpb2_1, RNA_pol_Rpb1_3~RNA_pol_Rpb2_1, RNA_pol_Rpb1_4~RNA_pol_Rpb2_1, RNA_pol_Rpb1_5~RNA_pol_Rpb2_1, RNA_pol_Rpb1_4~RNA_pol_Rpb2_3, RNA_pol_Rpb1_5~RNA_pol_Rpb2_3, RNA_pol_Rpb1_4~RNA_pol_Rpb2_4, RNA_pol_Rpb1_4~RNA_pol_Rpb2_5, RNA_pol_Rpb1_5~RNA_pol_Rpb2_5, RNA_pol_Rpb1_1~RNA_pol_Rpb2_6, RNA_pol_Rpb1_2~RNA_pol_Rpb2_6, RNA_pol_Rpb1_3~RNA_pol_Rpb2_6, RNA_pol_Rpb1_4~RNA_pol_Rpb2_6, RNA_pol_Rpb1_5~RNA_pol_Rpb2_6, RNA_pol_Rpb1_1~RNA_pol_Rpb2_7, RNA_pol_Rpb1_2~RNA_pol_Rpb2_7, RNA_pol_Rpb1_5~RNA_pol_Rpb2_7
Common GO terms GO:0000428 - DNA-directed RNA polymerase complex
GO:0001055 - RNA polymerase II activity
GO:0003677 - DNA binding
GO:0005737 - cytoplasm
GO:0008270 - zinc ion binding
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 1117
Pf

1 907
+ Bt
+ Hs
+ Dm
+ Hs
+ Hs
+ Sp
+ Hs
+ Sc
+ Hs
+ Sc
+ Hs
+ Hs
+ Hs
+ Hs
+ Hv
+ At
+ At
+ Hv
+ Sc
+ Nv

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Last updated: 15 Jul 2024