HitPredict

Interactor 1: U1135 (Q8VY74)
U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (U11/U12-35K)
Gene: SNRNP35

Interactor 2: SR30 (Q9XFR5)
Serine/arginine-rich splicing factor SR30 (At-SR30) (At-SRp30) (AtSR30) (SF2/ASF-like splicing modulator Srp30) (Serine-arginine rich RNA binding protein 30)
Gene: SR30

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.41	1.00	0.647

Property	Details
Experiments	15987817
Identification Methods	pull down
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003729 - mRNA binding GO:0005634 - nucleus GO:0016607 - nuclear speck
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 333 At			1 268
+	At
		1114811 RU17_ARATH (48-333): 2.69e-46: 164: 26.89		SR30_ARATH (1-268): 7.06e-65: 205: 100.00
+	At
		186867 U1135_ARATH (1-333): 5.74e-49: 168: 100.00		SR34_ARATH (1-242): 4.04e-56: 184: 60.71
+	At
		1163070 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		SR30_ARATH (1-268): 7.06e-65: 205: 100.00
+	At
		186862 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		SR34_ARATH (1-242): 4.04e-56: 184: 60.71
+	At
		1163069 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		Q9SPI1_ARATH (1-242): 1.79e-55: 182: 59.77
+	Mm
		857324 TIA1_MOUSE (59-277): 1.41e-39: 145: 14.93		Q542V3_MOUSE (8-260): 3.76e-40: 146: 34.67
+	At
		1257878 U1135_ARATH (1-333): 5.74e-49: 168: 100.00		RSZ33_ARATH (3-101): 3.45e-21: 92.2: 43.43
+	Hs
		680437 TIA1_HUMAN (59-277): 9.78e-40: 145: 14.93		SRSF3_HUMAN (6-102): 1.03e-22: 93.3: 37.62
+	Ce
		999480 Q09584_CAEEL (20-200): 1.81e-40: 146: 29.12		RSP6_CAEEL (6-80): 7.02e-22: 91.4: 42.67
+	At
		1163064 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		RSZ33_ARATH (3-101): 3.45e-21: 92.2: 43.43
+	Sc
		376899 PABP_YEAST (46-263): 4.76e-34: 133: 15.14		NOP3_YEAST (5-172): 4.48e-22: 96.4: 25.44
+	Hs
		516466 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		SRSF3_HUMAN (6-102): 1.03e-22: 93.3: 37.62
+	Hs
		680439 TIA1_HUMAN (59-277): 9.78e-40: 145: 14.93		TIAR_HUMAN (2-115): 2.61e-15: 76.6: 18.42
+	Hs
		680422 TIA1_HUMAN (59-277): 9.78e-40: 145: 14.93		TIA1_HUMAN (2-115): 2.28e-14: 73.9: 18.42
+	Hs
		516471 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		TIAR_HUMAN (2-115): 2.61e-15: 76.6: 18.42
+	Mm
		665745 TIA1_MOUSE (59-277): 1.41e-39: 145: 14.93		PABP1_MOUSE (99-191): 1.35e-10: 63.1: 14.43
+	Mm
		857340 TIA1_MOUSE (59-277): 1.41e-39: 145: 14.93		SRSF1_MOUSE (95-225): 3.09e-10: 60.9: 17.42
+	Hs
		516339 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PABP1_HUMAN (99-191): 1.19e-10: 63.5: 14.43
+	Sc
		376562 PABP_YEAST (46-263): 4.76e-34: 133: 15.14		PABP_YEAST (84-193): 2.48e-09: 59.3: 17.54