HitPredict

Interactor 1: LN28A (Q8K3Y3)
Protein lin-28 homolog A (Lin-28A) (Testis-expressed protein 17)
Gene: Lin28a

Interactor 2: Q99LF8 (Q99LF8)
Polyadenylate-binding protein (PABP)
Gene: Pabpc4

Species: Mus musculus

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.41	1.00	0.646

Property	Details
Experiments	19713958
Identification Methods	anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	CSD~RRM_1
Common GO terms	GO:0003729 - mRNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm GO:0010494 - cytoplasmic stress granule
Homologous interactions	18

Homologous interactions

Color coding for hit scores

	1 209 Mm			1 660
+	Hs
		1102100 LN28A_HUMAN (1-209): 1.25e-81: 243: 96.65		PABP4_HUMAN (1-660): 0: 576: 95.76
+	Hs
		550472 LN28A_HUMAN (1-209): 1.25e-81: 243: 96.65		PABP1_HUMAN (1-660): 0: 532: 72.29
+	Mm
		711000 LN28A_MOUSE (1-209): 4.43e-82: 244: 100.00		PABP1_MOUSE (1-660): 0: 531: 72.44
+	Hs
		994515 YBOX1_HUMAN (3-209): 3.56e-26: 104: 21.88		PABP4_HUMAN (1-660): 0: 576: 95.76
+	Hs
		550109 YBOX3_HUMAN (27-206): 4.77e-37: 134: 20.00		PABP1_HUMAN (1-660): 0: 532: 72.29
+	Hs
		550221 YBOX1_HUMAN (3-209): 3.56e-26: 104: 21.88		PABP1_HUMAN (1-660): 0: 532: 72.29
+	Hs
		994793 YBOX1_HUMAN (3-209): 3.56e-26: 104: 21.88		PABP3_HUMAN (1-660): 1.04e-170: 503: 66.42
+	Hs
		506145 LN28A_HUMAN (1-209): 1.25e-81: 243: 96.65		PAB4L_HUMAN (95-392): 3.8e-63: 215: 35.88
+	Hs
		506136 LN28B_HUMAN (11-205): 2.31e-63: 198: 66.15		PAB4L_HUMAN (95-392): 3.8e-63: 215: 35.88
+	Hs
		506153 YBOX2_HUMAN (3-199): 5.44e-43: 149: 24.76		PAB4L_HUMAN (95-392): 3.8e-63: 215: 35.88
+	Hs
		620594 LN28A_HUMAN (1-209): 1.25e-81: 243: 96.65		NUCL_HUMAN (2-89): 2.13e-19: 94.5: 30.68
+	Hs
		1387895 LN28A_HUMAN (1-209): 1.25e-81: 243: 96.65		PABP5_HUMAN (4-92): 2.63e-15: 80.3: 23.60
+	Hs
		506121 YBOX1_HUMAN (3-209): 3.56e-26: 104: 21.88		PAB4L_HUMAN (95-392): 3.8e-63: 215: 35.88
+	Hs
		1252486 LN28B_HUMAN (11-205): 2.31e-63: 198: 66.15		PABP5_HUMAN (4-92): 2.63e-15: 80.3: 23.60
+	Hs
		1387915 YBOX2_HUMAN (3-199): 5.44e-43: 149: 24.76		PABP5_HUMAN (4-92): 2.63e-15: 80.3: 23.60
+	Hs
		599856 YBOX3_HUMAN (27-206): 4.77e-37: 134: 20.00		PABP5_HUMAN (4-92): 2.63e-15: 80.3: 23.60
+	Hs
		620286 YBOX1_HUMAN (3-209): 3.56e-26: 104: 21.88		NUCL_HUMAN (2-89): 2.13e-19: 94.5: 30.68
+	Hs
		994708 YBOX1_HUMAN (3-209): 3.56e-26: 104: 21.88		PABP5_HUMAN (4-92): 2.63e-15: 80.3: 23.60