HitPredict

Interactor 1: NUP1 (Q9CAF4)
Nuclear pore complex protein NUP1 (Nuclear pore complex protein NUP136) (Nucleoporin 1) (Nucleoporin 136)
Gene: NUP1

Interactor 2: SMC5 (Q9LFS8)
Structural maintenance of chromosomes protein 5 (Protein EMBRYO DEFECTIVE 2782)
Gene: SMC5

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	21189294
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0005829 - cytosol
Homologous interactions	12

Homologous interactions

Color coding for hit scores

	1 1309 At			1 1053
+	Hs
		858009 NUP98_HUMAN (814-1292): 5.64e-53: 206: 15.93		SMC5_HUMAN (2-1046): 1.12e-89: 313: 28.85
+	Hs
		727284 NU214_HUMAN (16-930): 4.61e-19: 96.3: 10.69		SMC5_HUMAN (2-1046): 1.12e-89: 313: 28.85
+	Hs
		1221669 MINT_HUMAN (17-1304): 1.72e-16: 87.9: 7.76		SMC5_HUMAN (2-1046): 1.12e-89: 313: 28.85
+	Hs
		834628 NU153_HUMAN (576-1292): 1.89e-10: 68: 14.07		SMC5_HUMAN (2-1046): 1.12e-89: 313: 28.85
+	Hs
		1057770 NCOA6_HUMAN (23-849): 2.49e-09: 64.4: 9.40		SMC5_HUMAN (2-1046): 1.12e-89: 313: 28.85
+	Sc
		758753 NU100_YEAST (618-1131): 3.9e-10: 66.5: 12.65		SMC2_YEAST (22-1004): 1.33e-74: 270: 13.81
+	Hs
		148567 NUP98_HUMAN (814-1292): 5.64e-53: 206: 15.93		CTRO_HUMAN (515-945): 3.47e-20: 99.3: 8.88
+	Dm
		1358317 Q9VLS7_DROME (19-1051): 1.45e-26: 120: 8.29		Q9V3A7_DROME (121-878): 1.71e-22: 106: 13.21
+	Hs
		1101620 MGAL_HUMAN (752-1198): 5.35e-10: 66.6: 18.54		SMC4_HUMAN (107-1022): 1.74e-37: 155: 10.84
+	Hs
		149481 PCLO_HUMAN (21-1000): 2.58e-23: 110: 9.04		CTRO_HUMAN (515-945): 3.47e-20: 99.3: 8.88
+	Dm
		1362840 Q9VLS7_DROME (19-1051): 1.45e-26: 120: 8.29		Q9VCD8_DROME (154-978): 5.28e-17: 88.8: 12.70
+	Hs
		148539 NU153_HUMAN (576-1292): 1.89e-10: 68: 14.07		CTRO_HUMAN (515-945): 3.47e-20: 99.3: 8.88