HitPredict

Interactor 1: SKP1B (Q9FHW7)
SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2)
Gene: SKP1B

Interactor 2: FBL16 (Q9SN10)
F-box/LRR-repeat protein 16
Gene: FBL16

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.56	1.00	0.754

Property	Details
Experiments	17435085, 23166809
Identification Methods	two hybrid
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	F-box~Skp1
Common GO terms	GO:0019005 - SCF ubiquitin ligase complex GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 171 At			1 522
+	At
		1322473 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		SKIP2_ARATH (1-521): 1.19e-83: 270: 69.75
+	At
		1123015 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		TIR1_ARATH (43-510): 1.07e-56: 201: 19.07
+	At
		1123017 ASK4_ARATH (3-171): 5.6e-84: 245: 67.46		TIR1_ARATH (43-510): 1.07e-56: 201: 19.07
+	At
		1323373 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		AFB2_ARATH (41-500): 2.5e-56: 199: 18.39
+	At
		1123022 ASK3_ARATH (3-171): 9.57e-83: 242: 65.09		TIR1_ARATH (43-510): 1.07e-56: 201: 19.07
+	At
		1107590 SKP1A_ARATH (3-171): 7.81e-80: 235: 75.15		TIR1_ARATH (43-510): 1.07e-56: 201: 19.07
+	At
		137946 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		COI1_ARATH (46-445): 1.11e-49: 181: 17.29
+	At
		137936 SKP1A_ARATH (3-171): 7.81e-80: 235: 75.15		COI1_ARATH (46-445): 1.11e-49: 181: 17.29
+	At
		1173681 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		EBF2_ARATH (117-410): 6.32e-34: 137: 22.90
+	At
		1107595 SKP1A_ARATH (3-171): 7.81e-80: 235: 75.15		EBF2_ARATH (117-410): 6.32e-34: 137: 22.90
+	At
		1323394 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		EBF1_ARATH (79-436): 2.1e-28: 121: 19.00
+	At
		1338916 ASK4_ARATH (3-171): 5.6e-84: 245: 67.46		EBF1_ARATH (79-436): 2.1e-28: 121: 19.00
+	At
		1323364 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		SKP2A_ARATH (43-334): 8.52e-27: 113: 14.75
+	At
		1323409 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		GRH1_ARATH (38-413): 2.71e-25: 111: 17.98
+	At
		221523 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		SKP2B_ARATH (25-341): 1.6e-25: 109: 16.48
+	At
		1323347 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		Q9FMW7_ARATH (249-502): 1.62e-23: 104: 20.59
+	At
		221521 SKP1A_ARATH (3-171): 7.81e-80: 235: 75.15		SKP2B_ARATH (25-341): 1.6e-25: 109: 16.48
+	At
		1107609 SKP1A_ARATH (3-171): 7.81e-80: 235: 75.15		FBX14_ARATH (74-412): 3.4e-24: 108: 13.71
+	At
		1338929 ASK4_ARATH (3-171): 5.6e-84: 245: 67.46		BRL1_ARATH (6-380): 1.56e-19: 94.7: 11.71
+	At
		1323397 SKP1B_ARATH (1-171): 1.69e-83: 245: 100.00		FBL12_ARATH (188-423): 3.92e-20: 94.4: 20.17