HitPredict

Interactor 1: Q9FPI0 (Q9FPI0)
Ribosomal RNA-processing protein 42
Gene: RRP42

Interactor 2: RRP41 (Q9SP08)
Exosome complex component RRP41 homolog (Ribosomal RNA-processing protein 41) (AtRRP41) (AtRrp41p)
Gene: RRP41

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.71	1.00	0.845

Property	Details
Experiments	25144737, 21798944, 18160042
Identification Methods	affinity chromatography technology, two hybrid, tandem affinity purification, two hybrid array
Interaction Type	physical association, direct interaction, association

Property	Details
Interacting Pfam domains	RNase_PH~RNase_PH, RNase_PH~RNase_PH_C, RNase_PH_C~RNase_PH_C
Common GO terms	GO:0000176 - nuclear exosome (RNase complex) GO:0000177 - cytoplasmic exosome (RNase complex) GO:0034475 - U4 snRNA 3'-end processing GO:0071028 - nuclear mRNA surveillance
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 286 At			1 241
+	At
		1337646 CER7L_ARATH (3-285): 1.13e-78: 242: 26.32		RRP41_ARATH (1-241): 2.08e-88: 262: 100.00
+	At
		1340946 CER7_ARATH (3-284): 1.84e-74: 235: 26.76		RRP41_ARATH (1-241): 2.08e-88: 262: 100.00
+	Hs
		1284978 EXOS8_HUMAN (4-282): 1.59e-82: 251: 28.21		EXOS4_HUMAN (1-236): 1.32e-80: 243: 47.68
+	Hs
		1063768 EXOS7_HUMAN (1-281): 3.26e-81: 248: 37.37		EXOS4_HUMAN (1-236): 1.32e-80: 243: 47.68
+	Hs
		986725 EXOS9_HUMAN (3-285): 3.68e-67: 217: 23.86		EXOS4_HUMAN (1-236): 1.32e-80: 243: 47.68
+	Dm
		1100455 Q29QQ9_DROME (1-282): 1.07e-71: 224: 34.04		Q9VK19_DROME (1-232): 1.82e-74: 227: 40.60
+	Dm
		1100452 Q29QQ9_DROME (1-282): 1.07e-71: 224: 34.04		Q8SYC8_DROME (1-232): 6.74e-74: 226: 40.17
+	Hs
		1284945 EXOS8_HUMAN (4-282): 1.59e-82: 251: 28.21		EXOS8_HUMAN (1-234): 3.62e-59: 189: 19.85
+	Sp
		194779 RRP45_SCHPO (1-283): 4.84e-71: 222: 23.51		RRP41_SCHPO (1-235): 7.33e-70: 215: 39.83
+	Hs
		1063750 EXOS8_HUMAN (4-282): 1.59e-82: 251: 28.21		EXOS7_HUMAN (5-233): 7.24e-50: 166: 15.04
+	Hs
		1284980 EXOS8_HUMAN (4-282): 1.59e-82: 251: 28.21		EXOS5_HUMAN (2-234): 4.76e-50: 165: 25.11
+	Hs
		1063771 EXOS7_HUMAN (1-281): 3.26e-81: 248: 37.37		EXOS5_HUMAN (2-234): 4.76e-50: 165: 25.11
+	Hs
		1130042 EXOS8_HUMAN (4-282): 1.59e-82: 251: 28.21		EXOS6_HUMAN (3-228): 7.82e-46: 155: 28.75
+	Hs
		986709 EXOS9_HUMAN (3-285): 3.68e-67: 217: 23.86		EXOS8_HUMAN (1-234): 3.62e-59: 189: 19.85
+	Hs
		1063723 EXOS7_HUMAN (1-281): 3.26e-81: 248: 37.37		EXOS6_HUMAN (3-228): 7.82e-46: 155: 28.75
+	Dm
		1100457 Q29QQ9_DROME (1-282): 1.07e-71: 224: 34.04		Q9VW53_DROME (14-234): 5.92e-49: 165: 23.97
+	Hs
		986677 EXOS9_HUMAN (3-285): 3.68e-67: 217: 23.86		EXOS7_HUMAN (5-233): 7.24e-50: 166: 15.04
+	Hs
		986727 EXOS9_HUMAN (3-285): 3.68e-67: 217: 23.86		EXOS5_HUMAN (2-234): 4.76e-50: 165: 25.11
+	Hs
		986681 EXOS9_HUMAN (3-285): 3.68e-67: 217: 23.86		EXOS6_HUMAN (3-228): 7.82e-46: 155: 28.75