HitPredict

Interactor 1: CER7 (Q9M209)
Exosome complex component RRP45B (Protein ECERIFERUM 7) (RNA-processing protein CER7) (RRP45 homolog B) (Ribosomal RNA-processing protein 45B)
Gene: RRP45B

Interactor 2: RRP41 (Q9SP08)
Exosome complex component RRP41 homolog (Ribosomal RNA-processing protein 41) (AtRRP41) (AtRrp41p)
Gene: RRP41

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.54 1.00 0.737

The method score is based on:

Property Details
Experiments 25144737, 18160042
Identification Methods affinity chromatography technology, tandem affinity purification
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains RNase_PH~RNase_PH, RNase_PH~RNase_PH_C, RNase_PH_C~RNase_PH_C
Common GO terms GO:0000176 - nuclear exosome (RNase complex)
GO:0000177 - cytoplasmic exosome (RNase complex)
GO:0003723 - RNA binding
GO:0034475 - U4 snRNA 3'-end processing
GO:0071028 - nuclear mRNA surveillance
Homologous interactions 19

Homologous interactions

Color coding for hit scores

1 438
At

1 241
+ At
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+ Sp
+ Ss
+ Dm
+ Hs
+ Sc
+ Hs
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+ Sc

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Last updated: 15 Jul 2024