HitPredict

Interactor 1: SR34 (O22315)
Serine/arginine-rich-splicing factor SR34 (At-SR34) (At-SRp34) (AtSR34) (Pre-mRNA-splicing factor SF2) (SR1 protein)
Gene: SR34

Interactor 2: UBQ3 (Q1EC66)
Polyubiquitin 3 [Cleaved into: Ubiquitin]
Gene: UBQ3

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	23667124
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding GO:0005634 - nucleus
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 303 At			1 306
+	At
		58670 SR34A_ARATH (1-272): 3.1e-51: 172: 54.91		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		186465 PABP4_ARATH (7-199): 2.08e-32: 128: 16.08		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		955330 RS40_ARATH (7-301): 3.69e-33: 126: 30.23		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		983451 PABP5_ARATH (2-128): 1.85e-20: 93.2: 16.28		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	Hs
		475007 SRSF1_HUMAN (2-197): 1.21e-62: 200: 52.79		UBB_HUMAN (153-305): 2.64e-64: 204: 95.43
+	Hs
		475665 SRSF1_HUMAN (2-197): 1.21e-62: 200: 52.79		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Mm
		476715 TIA1_MOUSE (2-125): 8.51e-15: 75.9: 21.09		UBC_MOUSE (1-257): 3.33e-97: 303: 93.39
+	Rn
		1144257 PABP1_RAT (109-201): 1.21e-12: 70.1: 14.43		UBC_RAT (1-257): 1.1e-96: 304: 93.39
+	Mm
		476693 PABP1_MOUSE (109-201): 1.22e-12: 70.1: 14.43		UBC_MOUSE (1-257): 3.33e-97: 303: 93.39
+	Hs
		923968 SRSF1_HUMAN (2-197): 1.21e-62: 200: 52.79		RS27A_HUMAN (153-228): 2.61e-43: 147: 96.05
+	Hs
		923975 SRSF6_HUMAN (8-187): 3.28e-48: 165: 39.78		RS27A_HUMAN (153-228): 2.61e-43: 147: 96.05
+	Hs
		397933 SRSF1_HUMAN (2-197): 1.21e-62: 200: 52.79		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		475708 PABP4_HUMAN (116-201): 1.94e-13: 72.4: 17.78		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		475288 PABP1_HUMAN (109-201): 1.13e-12: 70.1: 14.43		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		1028556 SRSF9_HUMAN (8-228): 7.09e-56: 182: 41.63		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1028667 SRSF5_HUMAN (5-187): 1.54e-49: 167: 36.07		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1028932 SRSF6_HUMAN (8-187): 3.28e-48: 165: 39.78		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		397745 PABP1_HUMAN (109-201): 1.13e-12: 70.1: 14.43		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		108890 H0YIB4_HUMAN (124-175): 3.46e-16: 74.9: 57.69		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1031342 PABP4_HUMAN (116-201): 1.94e-13: 72.4: 17.78		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86