HitPredict

Interactor 1: MSI3 (O22469)
WD-40 repeat-containing protein MSI3
Gene: MSI3

Interactor 2: DDB1B (O49552)
DNA damage-binding protein 1b (UV-damaged DNA-binding protein 1b) (DDB1b)
Gene: DDB1B

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.80	0.553

Property	Details
Experiments	18223036
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	CPSF_A~WD40, MMS1_N~WD40
Common GO terms	-
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 424 At			1 1088
+	At
		1340748 HTD1_ARATH (27-387): 6.98e-81: 258: 23.53		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	At
		187004 MSI4_ARATH (6-312): 5.72e-36: 140: 14.20		DDB1B_ARATH (1-1088): 0: 1316: 100.00
+	At
		187019 MSI4_ARATH (6-312): 5.72e-36: 140: 14.20		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	At
		186951 MSI3_ARATH (1-199): 6.1e-30: 121: 10.00		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	At
		186944 MSI1_ARATH (260-419): 2.09e-22: 100: 19.19		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	Hs
		1082374 TBL1R_HUMAN (1-293): 1.22e-60: 206: 17.59		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	At
		221820 COP1_ARATH (144-335): 6.49e-13: 72.4: 24.48		DDB1B_ARATH (1-1088): 0: 1316: 100.00
+	At
		794497 COP1_ARATH (144-335): 6.49e-13: 72.4: 24.48		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	Hs
		1082263 WDR5B_HUMAN (204-423): 4.83e-50: 173: 18.18		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		1082202 RBBP7_HUMAN (217-419): 5.25e-31: 124: 16.82		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		1082355 GRWD1_HUMAN (290-411): 4.39e-15: 78.8: 18.25		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		997738 RBBP4_HUMAN (1-167): 1.81e-14: 76.8: 11.46		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		267761 TAF5L_HUMAN (1-136): 2.12e-15: 79.9: 11.11		SF3B3_HUMAN (3-1085): 0: 1013: 21.29
+	Hs
		1073127 GRWD1_HUMAN (290-411): 4.39e-15: 78.8: 18.25		SF3B3_HUMAN (3-1085): 0: 1013: 21.29
+	Hs
		1073168 NLE1_HUMAN (1-65): 9.36e-13: 71.8: 10.77		SF3B3_HUMAN (3-1085): 0: 1013: 21.29
+	Ce
		219829 LIN53_CAEEL (260-419): 4.77e-24: 105: 23.81		O44985_CAEEL (3-1085): 0: 951: 20.45
+	Sp
		143276 CKN1_SCHPO (185-394): 1.06e-14: 77.4: 27.06		DDB1_SCHPO (6-1088): 0: 809: 26.25
+	Hs
		1014128 TAF5_HUMAN (173-423): 4.88e-48: 177: 14.13		CPSF1_HUMAN (3-519): 7.47e-118: 398: 17.30
+	Hs
		1014208 NLE1_HUMAN (1-65): 9.36e-13: 71.8: 10.77		CPSF1_HUMAN (3-519): 7.47e-118: 398: 17.30
+	Ce
		954081 LIN53_CAEEL (260-419): 4.77e-24: 105: 23.81		CPSF1_CAEEL (622-1087): 4.1e-102: 353: 18.99