HitPredict

Interactor 1: DPO3E (P03007)
DNA polymerase III subunit epsilon (EC 2.7.7.7)
Gene: dnaQ

Interactor 2: DPO3B (P0A988)
Beta sliding clamp (Beta clamp) (Sliding clamp) (Beta-clamp processivity factor) (DNA polymerase III beta sliding clamp subunit)
Gene: dnaN

Species: Escherichia coli K-12

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.65 1.00 0.812

The method score is based on:

Property Details
Experiments 23435564, 23549287
Identification Methods mass spectrometry studies of complexes, surface plasmon resonance, molecular sieving
Interaction Type direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains DNA_pol3_beta_3~RNase_T
Common GO terms GO:0003677 - DNA binding
GO:0003887 - DNA-directed DNA polymerase activity
GO:0005829 - cytosol
GO:0006261 - DNA-templated DNA replication
GO:0008408 - 3'-5' exonuclease activity
and 2 others

more...
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 243
Ec

1 366
+ Bs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024