Interactor 1: RPB1 (P04050)
DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit 1) (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (RNA polymerase II subunit B220)
Gene: RPO21
Interactor 2: SPT5 (P27692)
Transcription elongation factor SPT5 (Chromatin elongation factor SPT5)
Gene: SPT5
Species: Saccharomyces cerevisiae S288C
Source: mint
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.96 | 1.00 | 0.984 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 12556496, 12242279, 11606527, 16429126, 32503921, 20042611, 35102600, 21467036, 14759368, 22973055, 24813444, 16554755, 33226341, 33888559, 19581288, 37968396, 9450930 |
| Identification Methods | affinity chromatography technology, pull down, tandem affinity purification, anti tag coimmunoprecipitation |
| Interaction Type | physical association, direct interaction, association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | RNA_pol_Rpb1_1~Spt5-NGN, KOW~RNA_pol_Rpb1_2 |
| Common GO terms | GO:0003677 - DNA binding GO:0005634 - nucleus GO:0005739 - mitochondrion GO:0006368 - transcription elongation by RNA polymerase II |
| Homologous interactions | 3 |
Homologous interactions
Color coding for hit scores 
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
