HitPredict

Interactor 1: SNRPA (P09012)
U1 small nuclear ribonucleoprotein A (U1 snRNP A) (U1-A) (U1A)
Gene: SNRPA

Interactor 2: NCBP1 (Q09161)
Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
Gene: NCBP1

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.60	1.00	0.776

Property	Details
Experiments	35271311, 32960270
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	MIF4G_like~RRM_1, MIF4G_like_2~RRM_1
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm
Homologous interactions	9

Homologous interactions

Color coding for hit scores

	1 282 Hs			1 790
+	Hs
		441268 RU2B_HUMAN (5-282): 1.37e-59: 190: 46.40		NCBP1_HUMAN (1-790): 0: 1180: 100.00
+	Hs
		643483 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		NCBP1_HUMAN (1-790): 0: 1180: 100.00
+	Hs
		47768 RBM47_HUMAN (12-281): 2.3e-39: 146: 18.68		NCBP1_HUMAN (1-790): 0: 1180: 100.00
+	Hs
		516479 PABP1_HUMAN (10-219): 3.06e-20: 92.2: 15.09		NCBP1_HUMAN (1-790): 0: 1180: 100.00
+	Hs
		998037 PABP4_HUMAN (11-199): 1.25e-18: 87.6: 18.42		NCBP1_HUMAN (1-790): 0: 1180: 100.00
+	Hs
		998026 ELAV2_HUMAN (156-281): 1.34e-13: 71.8: 15.91		NCBP1_HUMAN (1-790): 0: 1180: 100.00
+	Sc
		696629 RU1A_YEAST (1-281): 3.81e-48: 163: 20.42		NCBP1_YEAST (3-693): 2.4e-99: 329: 17.53
+	Sc
		693981 PUB1_YEAST (11-282): 2.91e-39: 144: 18.25		NCBP1_YEAST (3-693): 2.4e-99: 329: 17.53
+	Sc
		376713 PABP_YEAST (3-199): 1.47e-17: 84.2: 10.05		NCBP1_YEAST (3-693): 2.4e-99: 329: 17.53