HitPredict

Interactor 1: MAD56 (P0C5B2)
MADS-box transcription factor 56 (FDRMADS8) (OsMADS56) (RMADS214)
Gene: MADS56

Interactor 2: MAD56 (P0C5B2)
MADS-box transcription factor 56 (FDRMADS8) (OsMADS56) (RMADS214)
Gene: MADS56

Species: Oryza sativa Japonica Group

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	19558411
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634 - nucleus GO:0006357 - regulation of transcription by RNA polymerase II GO:0045944 - positive regulation of transcription by RNA polymerase II and 1 others more... GO:0046983 - protein dimerization activity
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 233 Os			1 233
+	Os
		472755 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD56_ORYSJ (1-233): 4.84e-78: 236: 100.00
+	Os
		1001544 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS7_ORYSJ (1-231): 1.52e-74: 228: 38.24
+	Os
		1014693 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS1_ORYSJ (1-220): 4.99e-74: 226: 40.36
+	Os
		1150821 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD17_ORYSJ (1-220): 4.76e-74: 226: 41.26
+	Gh
		1150834 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48
+	Os
		1150822 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS8_ORYSJ (1-228): 7.64e-72: 221: 37.13
+	Os
		472753 MAD56_ORYSJ (1-233): 4.84e-78: 236: 100.00		MADS7_ORYSJ (1-231): 1.52e-74: 228: 38.24
+	Gh
		87912 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2F9_GERHY (1-226): 7.55e-76: 231: 37.39
+	Gh
		87900 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2F8_GERHY (1-231): 4.87e-74: 226: 39.39
+	Os
		1102536 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD13_ORYSJ (1-182): 4.91e-69: 214: 45.41
+	Gh
		1150828 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q6EUV6_GERHY (1-230): 1.23e-71: 220: 39.49
+	Os
		1000291 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS5_ORYSJ (1-228): 2.28e-67: 208: 37.39
+	Os
		1014685 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD14_ORYSJ (1-230): 5.55e-63: 198: 34.55
+	Os
		472756 MAD56_ORYSJ (1-233): 4.84e-78: 236: 100.00		MAD50_ORYSJ (1-231): 2.02e-64: 201: 61.91
+	At
		571271 Q1PEU3_ARATH (1-232): 1.36e-76: 233: 37.87		AG_ARATH (2-212): 4.04e-65: 204: 41.98
+	Gh
		1150835 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q9FST1_GERHY (1-229): 6.14e-65: 203: 35.47
+	Gh
		87922 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2G0_GERHY (1-214): 4.09e-65: 203: 35.78
+	Os
		472754 MAD56_ORYSJ (1-233): 4.84e-78: 236: 100.00		MAD14_ORYSJ (1-230): 5.55e-63: 198: 34.55
+	Gh
		87932 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2G1_GERHY (1-189): 6.5e-64: 200: 37.04