HitPredict

Interactor 1: XRN1 (P22147)
5'-3' exoribonuclease 1 (EC 3.1.13.-) (DNA strand transfer protein beta) (STP-beta) (KAR(-)-enhancing mutation protein) (Strand exchange protein 1) (p175)
Gene: XRN1

Interactor 2: LSM1 (P47017)
Sm-like protein LSm1 (SPB8 protein)
Gene: LSM1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.88	0.60	0.729

Property	Details
Experiments	16554755, 16429126, 10747033, 37746059, 37968396, 14759368
Identification Methods	affinity chromatography technology, biochemical, anti tag coimmunoprecipitation, tandem affinity purification
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000932 - P-body GO:0003682 - chromatin binding GO:0003729 - mRNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm
Homologous interactions	4

Homologous interactions

Color coding for hit scores

	1 1528 Sc			1 172
+	Sc
		605109 XRN1_YEAST (1-1528): 0: 2262: 100.00		LSM7_YEAST (8-119): 4.92e-26: 97.5: 27.97
+	Sc
		605081 XRN1_YEAST (1-1528): 0: 2262: 100.00		LSM8_YEAST (43-150): 4.47e-21: 84.7: 18.52
+	Sc
		605117 XRN1_YEAST (1-1528): 0: 2262: 100.00		LSM3_YEAST (46-120): 1.16e-19: 80.2: 29.87
+	Hs
		167704 XRN1_HUMAN (1-1257): 0: 1556: 33.64		LSM1_HUMAN (38-164): 1.07e-33: 117: 36.22