HitPredict

Interactor 1: RRP43 (P25359)
Exosome complex component RRP43 (Ribosomal RNA-processing protein 43)
Gene: RRP43

Interactor 2: RRP42 (Q12277)
Exosome complex component RRP42 (Ribosomal RNA-processing protein 42)
Gene: RRP42

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.84 0.60 0.712

The method score is based on:

Property Details
Experiments 16429126, 16829593, 16554755, 31662437, 37968396
Identification Methods affinity chromatography technology, tandem affinity purification
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000176 - nuclear exosome (RNase complex)
GO:0000177 - cytoplasmic exosome (RNase complex)
GO:0000178 - exosome (RNase complex)
GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 - RNA binding
and 11 others

more...
Homologous interactions 2

Homologous interactions

Color coding for hit scores

1 394
Sc

1 265
+ Sc
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024