HitPredict

Interactor 1: NDC1 (P32500)
Nucleoporin NDC1 (Nuclear division cycle protein 1) (Nuclear pore protein NDC1)
Gene: NDC1

Interactor 2: NUP53 (Q03790)
Nucleoporin NUP53 (Nuclear pore protein NUP53)
Gene: NUP53

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.88 0.60 0.729

The method score is based on:

Property Details
Experiments 10688190, 11283351, 19414609, 37968396, 18046405, 28183979
Identification Methods two hybrid, two hybrid pooling approach, pull down, affinity chromatography technology, dihydrofolate reductase reconstruction
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0005635 - nuclear envelope
GO:0005643 - nuclear pore
GO:0006913 - nucleocytoplasmic transport
GO:0006999 - nuclear pore organization
GO:0017056 - structural constituent of nuclear pore
and 2 others

more...
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 655
Sc

1 475
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024