HitPredict

Interactor 1: RPB3 (P37382)
DNA-directed RNA polymerase II subunit RPB3 (RNA polymerase II subunit 3) (RNA polymerase II subunit B3) (DNA-directed RNA polymerase II 33 kDa polypeptide)
Gene: RPB3

Interactor 2: RPB11 (P87123)
DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (DNA-directed RNA polymerase II 14.1 kDa polypeptide)
Gene: RPB11

Species: Schizosaccharomyces pombe 972h-

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.92 1.00 0.962

The method score is based on:

Property Details
Experiments 9642054, 11839823, 10648788, 10503538, 9548938, 9325316, 11168400
Identification Methods far western blotting, affinity chromatography technology, pull down, biochemical
Interaction Type direct interaction, physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains RNA_pol_L~RNA_pol_L_2
Common GO terms GO:0001055 - RNA polymerase II activity
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0005665 - RNA polymerase II, core complex
GO:0005829 - cytosol
and 3 others

more...
Homologous interactions 17

Homologous interactions

Color coding for hit scores

1 297
Sp

1 123
+ Sc
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Sc
+ Mm
+ Dm
+ Hs
+ At
+ At
+ Sp
+ Dm
+ Sc
+ Ss
+ Mj

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024