HitPredict

Interactor 1: TRS20 (P38334)
Trafficking protein particle complex subunit 20 (TRAPP subunit 20) (Transport protein particle 20 kDa subunit)
Gene: TRS20

Interactor 2: TRS33 (Q99394)
Trafficking protein particle complex subunit 33 (TRAPP subunit 33) (Transport protein particle 33 kDa subunit)
Gene: TRS33

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.85	1.00	0.926

The method score is based on:

Property	Details
Experiments	20375281, 11805826, 17027922, 16429126, 37968396
Identification Methods	anti tag coimmunoprecipitation, tandem affinity purification, two hybrid, affinity chromatography technology
Interaction Type	physical association, direct interaction, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	Sedlin_N~TRAPP
Common GO terms	GO:0000407 - phagophore assembly site GO:0005783 - endoplasmic reticulum GO:0005829 - cytosol GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006891 - intra-Golgi vesicle-mediated transport and 7 others more... GO:0016236 - macroautophagy GO:0030008 - TRAPP complex GO:0042147 - retrograde transport, endosome to Golgi GO:0065003 - protein-containing complex assembly GO:1990070 - TRAPPI protein complex GO:1990071 - TRAPPII protein complex GO:1990072 - TRAPPIII protein complex
Homologous interactions	7

Homologous interactions

Color coding for hit scores

	1	175
Sc

1	268

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024