HitPredict

Interactor 1: LRP1 (P38801)
Exosome complex protein LRP1 (Like an rRNA processing protein 1) (Yeast C1D domain-containing protein) (rRNA processing protein 47)
Gene: LRP1

Interactor 2: RRP45 (Q05636)
Exosome complex component RRP45 (Ribosomal RNA-processing protein 45)
Gene: RRP45

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.77	0.60	0.683

The method score is based on:

Property	Details
Experiments	12837249, 16554755, 37968396, 14759368
Identification Methods	affinity chromatography technology, tandem affinity purification
Interaction Type	physical association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000178 - exosome (RNase complex) GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005730 - nucleolus and 4 others more... GO:0034475 - U4 snRNA 3'-end processing GO:0034476 - U5 snRNA 3'-end processing GO:0071028 - nuclear mRNA surveillance GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process
Homologous interactions	2

Homologous interactions

Color coding for hit scores

	1	184
Sc

1	305

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024