Interactor 1: LSM5 (P40089)
U6 snRNA-associated Sm-like protein LSm5
Gene: LSM5

Interactor 2: LSM8 (P47093)
U6 snRNA-associated Sm-like protein LSm8
Gene: LSM8

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.85 1.00 0.924

The method score is based on:

Property Details
Experiments 10428970, 10900456, 10688190, 16554755, 37968396
Identification Methods two hybrid, affinity chromatography technology, tandem affinity purification
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0005688 - U6 snRNP
GO:0005730 - nucleolus
and 4 others

more...

Homologous interactions 14

Homologous interactions

Color coding for hit scores

1 93
Sc

1 109
+ Sc
+ Hs
+ Hs
+ Sc
+ Dm
+ Sc
+ Sp
+ Hs
+ Mm
+ Sc
+ Hs
+ Hs
+ Dm
+ Ce

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024